RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 CREB1P16220 341 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 PDAP1Q13442 181 aaKnown RBP17.07■□□□□ 0.32
COPS7A-202ENST00000455113 DNASE1L3Q13609 305 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 TSTA3Q13630 321 aaPredicted RBP17.07■□□□□ 0.32
COPS7A-202ENST00000455113 ARHGAP19Q14CB8 494 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 CCSMST1Q4G0I0 132 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 ZC3H12BQ5HYM0 836 aaKnown RBP17.07■□□□□ 0.32
COPS7A-202ENST00000455113 CPNE9Q8IYJ1 553 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 FLVCR1-AS1Q8TAF5 88 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 ACMSDQ8TDX5 336 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 EXTL1Q92935 676 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 ZUFSPQ96AP4 578 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 BBC3Q96PG8 261 aaPredicted RBP17.07■□□□□ 0.32
COPS7A-202ENST00000455113 SMC6Q96SB8 1091 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 SLC30A3Q99726 388 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 GPR87Q9BY21 358 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 VPS11Q9H270 941 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 POPDC3Q9HBV1 291 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 GPAMQ9HCL2 828 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 FAM60AQ9NP50 221 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 PCMTD2Q9NV79 361 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 IL17BQ9UHF5 180 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 TLK1Q9UKI8 766 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 PLCL2Q9UPR0 1127 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 ACTL7BQ9Y614 415 aa17.07■□□□□ 0.32
COPS7A-202ENST00000455113 ZFYVE26Q68DK2 2539 aa17.06■□□□□ 0.32
COPS7A-202ENST00000455113 ARHGEF33A8MVX0 844 aa17.06■□□□□ 0.32
COPS7A-202ENST00000455113 PRKAR1AP10644 381 aa17.06■□□□□ 0.32
COPS7A-202ENST00000455113 AGXTP21549 392 aa17.06■□□□□ 0.32
COPS7A-202ENST00000455113 GMPRP36959 345 aa17.06■□□□□ 0.32
COPS7A-202ENST00000455113 DEFB110Q30KQ9 67 aa17.06■□□□□ 0.32
COPS7A-202ENST00000455113 TLDC1Q6P9B6 456 aa17.06■□□□□ 0.32
COPS7A-202ENST00000455113 MYO1HQ8N1T3 1032 aa17.06■□□□□ 0.32
COPS7A-202ENST00000455113 GIMAP7Q8NHV1 300 aa17.06■□□□□ 0.32
COPS7A-202ENST00000455113 DENND1AQ8TEH3 1009 aa17.06■□□□□ 0.32
COPS7A-202ENST00000455113 SMPDL3AQ92484 453 aa17.06■□□□□ 0.32
COPS7A-202ENST00000455113 TWSG1Q9GZX9 223 aa17.06■□□□□ 0.32
COPS7A-202ENST00000455113 ACOT9Q9Y305 439 aa17.06■□□□□ 0.32
COPS7A-202ENST00000455113 TARM1B6A8C7 271 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 MYO1CO00159 1063 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 MEN1O00255 615 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 NKX2-8O15522 239 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 ZNF749O43361 778 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 CMPK1P30085 196 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 RPA3P35244 121 aaPredicted RBP17.05■□□□□ 0.32
COPS7A-202ENST00000455113 SLC18A2Q05940 514 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 CDC20Q12834 499 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 ZIC1Q15915 447 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 CYP2A13Q16696 494 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 CRTC2Q53ET0 693 aaPredicted RBP17.05■□□□□ 0.32
COPS7A-202ENST00000455113 FAM199XQ6PEV8 388 aaPredicted RBP17.05■□□□□ 0.32
COPS7A-202ENST00000455113 BORAQ6PGQ7 559 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 PAQR3Q6TCH7 311 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 TMEM207Q6UWW9 146 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 UBE2R2Q712K3 238 aaPredicted RBP17.05■□□□□ 0.32
COPS7A-202ENST00000455113 FAM20CQ8IXL6 584 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 SYTL1Q8IYJ3 562 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 LMNTD1Q8N9Z9 388 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 FBXO15Q8NCQ5 510 aaPredicted RBP17.05■□□□□ 0.32
COPS7A-202ENST00000455113 CT55Q8WUE5 264 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 ASB11Q8WXH4 323 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 CABS1Q96KC9 395 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 DPH2Q9BQC3 489 aaPredicted RBP17.05■□□□□ 0.32
COPS7A-202ENST00000455113 FAM117AQ9C073 453 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 TXLNGQ9NUQ3 528 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 UTP6Q9NYH9 597 aaKnown RBP17.05■□□□□ 0.32
COPS7A-202ENST00000455113 SRPK3Q9UPE1 567 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 PCDHGA6Q9Y5G7 932 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 MRPS18BQ9Y676 258 aaKnown RBP17.05■□□□□ 0.32
COPS7A-202ENST00000455113 PCM1Q15154 2024 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 CACNA1GO43497 2377 aa17.05■□□□□ 0.32
COPS7A-202ENST00000455113 ZSCAN9O15535 394 aaPredicted RBP17.04■□□□□ 0.32
COPS7A-202ENST00000455113 SPAG7O75391 227 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 WISP3O95389 354 aaPredicted RBP17.04■□□□□ 0.32
COPS7A-202ENST00000455113 SFTPCP11686 197 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 ZNF37AP17032 561 aaPredicted RBP17.04■□□□□ 0.32
COPS7A-202ENST00000455113 IRF9Q00978 393 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 ERV3-1Q14264 604 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.04■□□□□ 0.32
COPS7A-202ENST00000455113 PRAMEF17Q5VTA0 474 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 FIGLAQ6QHK4 219 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 DSELQ8IZU8 1212 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 BANPQ8N9N5 519 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 MCOLN3Q8TDD5 553 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 MIPEPQ99797 713 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 C17orf62Q9BQA9 187 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 NDC1Q9BTX1 674 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 KLHL20Q9Y2M5 609 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 SNRNP200O75643 2136 aaKnown RBP17.04■□□□□ 0.32
COPS7A-202ENST00000455113 SPTBP11277 2137 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 A0A087X1B8 175 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 CREG1O75629 220 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 CCNDBP1O95273 360 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 C8GP07360 202 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 HIST1H2AGP0C0S8 130 aaPredicted RBP17.04■□□□□ 0.32
COPS7A-202ENST00000455113 HIST1H2ADP20671 130 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 HPDP32754 393 aaPredicted RBP17.04■□□□□ 0.32
COPS7A-202ENST00000455113 CCR10P46092 362 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 PNLIPRP1P54315 467 aa17.04■□□□□ 0.32
COPS7A-202ENST00000455113 IL2P60568 153 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms