RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 NCBP1Q09161 790 aaKnown RBP4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 PMPCAQ10713 525 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 TRAP1Q12931 704 aaKnown RBP4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 GPS2Q13227 327 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 RFTN1Q14699 578 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 PRKD1Q15139 912 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 EXOC3L2Q2M3D2 409 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 SOWAHAQ2M3V2 549 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF829Q3KNS6 432 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ANKRD55Q3KP44 614 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 FAM174BQ3ZCQ3 159 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 C6orf141Q5SZD1 244 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 LRRC8EQ6NSJ5 796 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 AADACL2Q6P093 401 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 BLOC1S2Q6QNY1 142 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 FAM198BQ6UWH4 519 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF852Q6ZMS4 543 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 PAQR9Q6ZVX9 377 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 KCTD8Q6ZWB6 473 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 LUZP2Q86TE4 346 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ASPGQ86U10 573 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 TSPAN33Q86UF1 283 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 VPS36Q86VN1 386 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 FOXRED2Q8IWF2 684 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 KLHL36Q8N4N3 616 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ADPRHL1Q8NDY3 354 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 NUDT10Q8NFP7 164 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 OR4A16Q8NH70 328 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF596Q8TC21 504 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 LRRC20Q8TCA0 184 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 TRPC4APQ8TEL6 797 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 WIPF2Q8TF74 440 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF707Q96C28 371 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ORAI1Q96D31 301 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 SPDL1Q96EA4 605 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 NUDT11Q96G61 164 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 APOLD1Q96LR9 279 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 PRRC1Q96M27 445 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ALS2CR12Q96Q35 445 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 PANX1Q96RD7 426 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 TAAR6Q96RI8 345 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 DDOQ99489 341 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 MNTQ99583 582 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 NPAS2Q99743 824 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 CPNE1Q99829 537 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 C1QTNF3Q9BXJ4 246 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 MAGT1Q9H0U3 335 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 SAP30LQ9HAJ7 183 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 APMAPQ9HDC9 416 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 TRIM36Q9NQ86 728 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 PNO1Q9NRX1 252 aaKnown RBP4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 NRBP2Q9NSY0 501 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 FAM30AQ9NZY2 134 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 GCNT4Q9P109 453 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 MBD2Q9UBB5 411 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 RHCGQ9UBD6 479 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 RNF14Q9UBS8 474 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 SEC14L3Q9UDX4 400 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 RNF150Q9ULK6 438 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ERVK-19Q9WJR5 959 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 IFT52Q9Y366 437 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 SH3GLB1Q9Y371 365 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 PKP3Q9Y446 797 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZHX2Q9Y6X8 837 aa4.26□□□□□ -1.73
HMGB3P21-201ENST00000452483 A0A087WUV0 522 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 CPED1A4D0V7 1026 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 MBLAC1A4D2B0 266 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 TUBAL3A6NHL2 446 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 GABRR3A8MPY1 467 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 IQCF5A8MTL0 148 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 H0YGN5 161 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 K7ESM1 405 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ABCD4O14678 606 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 SAP30O75446 220 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 CREG1O75629 220 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 SORBS2O94875 1100 aaKnown RBP4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 GH2P01242 217 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 MT-ND1P03886 318 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ITGB3P05106 788 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 HLA-DOAP06340 250 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 PROS1P07225 676 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 CA3P07451 260 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 CLTAP09496 248 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ALPIP09923 528 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 VSIG10L2P0DP72 767 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 PNMTP11086 282 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 FCGR2AP12318 317 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 SRMP19623 302 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 UCP1P25874 307 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 PIK3R1P27986 724 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 HTR2AP28223 471 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 EPHB2P29323 1055 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 GABRA5P31644 462 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 FCGR2BP31994 310 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 ASCL1P50553 236 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 CLDN2P57739 230 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 BPIFB4P59827 614 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 SSTP61278 116 aa4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 POLR2LP62875 67 aaKnown RBP4.25□□□□□ -1.73
HMGB3P21-201ENST00000452483 CSNK2A1P68400 391 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms