RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 DHX9Q08211 1270 aaKnown RBP11.91□□□□□ -0.5
CPSF4-208ENST00000452047 ICE2Q659A1 982 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 PIWIL4Q7Z3Z4 852 aaKnown RBP11.91□□□□□ -0.5
CPSF4-208ENST00000452047 CNTN4Q8IWV2 1026 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 LRRC56Q8IYG6 542 aaPredicted RBP11.91□□□□□ -0.5
CPSF4-208ENST00000452047 CPNE9Q8IYJ1 553 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 PPFIBP2Q8ND30 876 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 CPT1CQ8TCG5 803 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 INPP5DQ92835 1189 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 EBNA1BP2Q99848 306 aaKnown RBP11.91□□□□□ -0.5
CPSF4-208ENST00000452047 ZNF552Q9H707 407 aaPredicted RBP11.91□□□□□ -0.5
CPSF4-208ENST00000452047 PLAC1Q9HBJ0 212 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 MRPS30Q9NP92 439 aaKnown RBP11.91□□□□□ -0.5
CPSF4-208ENST00000452047 IARS2Q9NSE4 1012 aaKnown RBP11.91□□□□□ -0.5
CPSF4-208ENST00000452047 C5AR2Q9P296 337 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 ZC3H7BQ9UGR2 993 aaKnown RBP11.91□□□□□ -0.5
CPSF4-208ENST00000452047 ASIC3Q9UHC3 531 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 NXT1Q9UKK6 140 aaKnown RBP11.91□□□□□ -0.5
CPSF4-208ENST00000452047 MAP4K5Q9Y4K4 846 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 HS3ST3B1Q9Y662 390 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 MAU2Q9Y6X3 613 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 ZNF839A8K0R7 811 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 CYSRT1A8MQ03 144 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 H0YGG7 62 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 VPS26AO75436 327 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 TTC4O95801 387 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 EIF2S1P05198 315 aaKnown RBP11.9□□□□□ -0.5
CPSF4-208ENST00000452047 ERVK-10P10266 1014 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 GABRB3P28472 473 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 IMPA1P29218 277 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 EMP3P54852 163 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 ARF3P61204 181 aaPredicted RBP11.9□□□□□ -0.5
CPSF4-208ENST00000452047 RELAQ04206 551 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 SPTAN1Q13813 2472 aaKnown RBP11.9□□□□□ -0.5
CPSF4-208ENST00000452047 UBAP2LQ14157 1087 aaKnown RBP11.9□□□□□ -0.5
CPSF4-208ENST00000452047 MUM1Q2TAK8 710 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 PRR30Q53SZ7 412 aaPredicted RBP11.9□□□□□ -0.5
CPSF4-208ENST00000452047 PRMT9Q6P2P2 845 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 KIRREL2Q6UWL6 708 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 IGFL3Q6UXB1 125 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 SHISA6Q6ZSJ9 500 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 ATCAYQ86WG3 371 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 IGDCC3Q8IVU1 814 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 ARHGEF39Q8N4T4 335 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 PNPLA2Q96AD5 504 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 OR2A5Q96R48 311 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 NDNQ99608 321 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 MFRPQ9BY79 579 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 SOX17Q9H6I2 414 aaPredicted RBP11.9□□□□□ -0.5
CPSF4-208ENST00000452047 ZNF304Q9HCX3 659 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 LUZP4Q9P127 313 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 STOX2Q9P2F5 926 aaPredicted RBP11.9□□□□□ -0.5
CPSF4-208ENST00000452047 CDC23Q9UJX2 597 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 FBXL4Q9UKA2 621 aa11.9□□□□□ -0.5
CPSF4-208ENST00000452047 IGLV3-12A0A075B6K2 115 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 SMAPO00193 183 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 ZBTB14O43829 449 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 CCNDBP1O95273 360 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 SYF2O95926 243 aaKnown RBP11.89□□□□□ -0.51
CPSF4-208ENST00000452047 EZRP15311 586 aaKnown RBP11.89□□□□□ -0.51
CPSF4-208ENST00000452047 UQCRFS1P47985 274 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 AIMP2Q13155 320 aaKnown RBP11.89□□□□□ -0.51
CPSF4-208ENST00000452047 TSTA3Q13630 321 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-208ENST00000452047 HKDC1Q2TB90 917 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 SPANXN3Q5MJ09 141 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 RBM20Q5T481 1227 aaKnown RBP11.89□□□□□ -0.51
CPSF4-208ENST00000452047 UBE2R2Q712K3 238 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-208ENST00000452047 PCGF5Q86SE9 256 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 GALNT7Q86SF2 657 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 CREG2Q8IUH2 290 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 CSNK1A1LQ8N752 337 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 GALNT11Q8NCW6 608 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 STT3BQ8TCJ2 826 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 MESP1Q9BRJ9 268 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 WDR83Q9BRX9 315 aaKnown RBP11.89□□□□□ -0.51
CPSF4-208ENST00000452047 NAT9Q9BTE0 207 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 ATP13A2Q9NQ11 1180 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 SEMA3GQ9NS98 782 aa11.89□□□□□ -0.51
CPSF4-208ENST00000452047 CUEDC1Q9NWM3 386 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-208ENST00000452047 TRMT6Q9UJA5 497 aaKnown RBP11.89□□□□□ -0.51
CPSF4-208ENST00000452047 RUVBL1Q9Y265 456 aaKnown RBP11.89□□□□□ -0.51
CPSF4-208ENST00000452047 TP73O15350 636 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 ALOX12BO75342 701 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 AHSGP02765 367 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 ALPPP05187 535 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 ZGLP1P0C6A0 271 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 CDKN2DP55273 166 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 TBPL1P62380 186 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 ABATP80404 500 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 KLC1Q07866 573 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 DSG2Q14126 1118 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 MORF4L2Q15014 288 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 INPP5JQ15735 1006 aaPredicted RBP11.88□□□□□ -0.51
CPSF4-208ENST00000452047 BBS9Q3SYG4 887 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 PRAMEF13Q5VWM6 474 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 LRRC8EQ6NSJ5 796 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 KIAA0408Q6ZU52 694 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 SYDE1Q6ZW31 735 aaPredicted RBP11.88□□□□□ -0.51
CPSF4-208ENST00000452047 FAM26EQ8N5C1 309 aa11.88□□□□□ -0.51
CPSF4-208ENST00000452047 EFCAB3Q8N7B9 438 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms