RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 OR52E4Q8NGH9 312 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 OR10A6Q8NH74 314 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 CLHC1Q8NHS4 586 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 RAET1EQ8TD07 263 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 TSPAN17Q96FV3 270 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 PDXPQ96GD0 296 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 MRGPRX2Q96LB1 330 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 ZSWIM3Q96MP5 696 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 NSUN5Q96P11 429 aaKnown RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 RAD9AQ99638 391 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 PITX2Q99697 317 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 SAV1Q9H4B6 383 aaPredicted RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 ASB7Q9H672 318 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 HEXA-AS1Q9H8Q6 139 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 AMBNQ9NP70 447 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 KRT84Q9NSB2 600 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 DCAF13Q9NV06 445 aaKnown RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 SLC39A1Q9NY26 324 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 RDH8Q9NYR8 311 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 KIF17Q9P2E2 1029 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 COPS3Q9UNS2 423 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 MAPRE3Q9UPY8 281 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 CMAHPQ9Y471 501 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 FKBP7Q9Y680 259 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 DICER1Q9UPY3 1922 aaKnown RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 TRAV19A0A0A6YYK7 116 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 LRRC14BA6NHZ5 514 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 FGF18O76093 207 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 RETP07949 1114 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 ARSBP15848 533 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 RPS19P39019 145 aaKnown RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 MAP2K3P46734 347 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 RORCP51449 518 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 RAB14P61106 215 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 RPP38P78345 283 aaKnown RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 PLIN5Q00G26 463 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 RUNX1T1Q06455 604 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 PWP1Q13610 501 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 EXOSC2Q13868 293 aaKnown RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 PAFAH1B3Q15102 231 aaKnown RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.38□□□□□ -1.07
LSM5-208ENST00000450169 CARD16Q5EG05 197 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 LCN1P1Q5VSP4 162 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 TFAP2EQ6VUC0 442 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 RAB44Q7Z6P3 723 aaPredicted RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 GALNT10Q86SR1 603 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 ISCA2Q86U28 154 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 GLCCI1Q86VQ1 547 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 FAM131BQ86XD5 332 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 TMEM151BQ8IW70 566 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 ETFBKMTQ8IXQ9 262 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 NIM1KQ8IY84 436 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 PGBD5Q8N414 524 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 DNAJC22Q8N4W6 341 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 WDR48Q8TAF3 677 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 SLC22A8Q8TCC7 542 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 BTN2A2Q8WVV5 523 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 FOPNLQ96NB1 174 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 QRFPRQ96P65 431 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 GFM1Q96RP9 751 aaKnown RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 C12orf57Q99622 126 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 THUMPD3Q9BV44 507 aaKnown RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 ASPNQ9BXN1 380 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 SHARPINQ9H0F6 387 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 SPASTQ9UBP0 616 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 RGS17Q9UGC6 210 aaPredicted RBP8.38□□□□□ -1.07
LSM5-208ENST00000450169 UBQLN2Q9UHD9 624 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 SIX4Q9UIU6 781 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 ACSL5Q9ULC5 683 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 MGAT4AQ9UM21 535 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 GABRQQ9UN88 632 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 ING4Q9UNL4 249 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 NEUROG3Q9Y4Z2 214 aa8.38□□□□□ -1.07
LSM5-208ENST00000450169 FABP12A6NFH5 140 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 MYO1GB0I1T2 1018 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 E9PAM4 449 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 CD3EAPO15446 510 aaKnown RBP8.37□□□□□ -1.07
LSM5-208ENST00000450169 YKT6O15498 198 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 NUPL2O15504 423 aaKnown RBP8.37□□□□□ -1.07
LSM5-208ENST00000450169 SERPINA1P01009 418 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 IFNA14P01570 189 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 PCSK2P16519 638 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 HOXB6P17509 224 aaKnown RBP8.37□□□□□ -1.07
LSM5-208ENST00000450169 GPC1P35052 558 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 NUP62P37198 522 aaPredicted RBP8.37□□□□□ -1.07
LSM5-208ENST00000450169 DGKQP52824 942 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 AP1S2P56377 157 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 ERVFC1P60507 584 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 ERVK-8P63133 956 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 SP4Q02446 784 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 GTF2H3Q13889 308 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 FGFBP1Q14512 234 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 PGM5Q15124 567 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 TSTQ16762 297 aaKnown RBP8.37□□□□□ -1.07
LSM5-208ENST00000450169 WSCD2Q2TBF2 565 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 FAM209BQ5JX69 171 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 GPR158Q5T848 1215 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 SYPL2Q5VXT5 272 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 LRFN4Q6PJG9 635 aa8.37□□□□□ -1.07
LSM5-208ENST00000450169 C19orf48Q6RUI8 117 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms