RNA–Protein interactions for RNA: ENST00000449832.1

AC009961.3-201, humanhuman

BASIC

Gene AC009961.3, Length 765 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.3-201ENST00000449832 SMC3Q9UQE7 1217 aa3.21□□□□□ -1.9
AC009961.3-201ENST00000449832 TMED3Q9Y3Q3 217 aa3.21□□□□□ -1.9
AC009961.3-201ENST00000449832 AKAP12Q02952 1782 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 ARHGAP31Q2M1Z3 1444 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 SMG6Q86US8 1419 aaKnown RBP3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 YEATS2Q9ULM3 1422 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 UQCRHLA0A096LP55 91 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 A0A1W2PPM1 405 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 CTAGE5O15320 804 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 BCL2L11O43521 198 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 UQCRHP07919 91 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 SKILP12757 684 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 GABPB1Q06547 395 aaPredicted RBP3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 SLC25A30Q5SVS4 291 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 NUP54Q7Z3B4 507 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 OR2L2Q8NH16 312 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 SYN2Q92777 582 aaPredicted RBP3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 SFXN2Q96NB2 322 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 GOLPH3LQ9H4A5 285 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 ZHX3Q9H4I2 956 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 Q9H8V8 135 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 NDE1Q9NXR1 346 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 ADD3Q9UEY8 706 aaKnown RBP3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 MAN1B1Q9UKM7 699 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 TP53TG3Q9ULZ0 132 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 CCDC88BA6NC98 1476 aa3.2□□□□□ -1.9
AC009961.3-201ENST00000449832 LOC105371242A0A075B767 164 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 TRBV5-5A0A0J9YX44 114 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 hCG_1807616A0A1W2PRN6 198 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 FPGTO14772 594 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 FRAT2O75474 233 aaPredicted RBP3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 CEACAM4O75871 244 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 PORP16435 677 aaPredicted RBP3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 PTGER4P35408 488 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 SOX3P41225 446 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 TDO2P48775 406 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 ITGA7Q13683 1181 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 SIM2Q14190 667 aaPredicted RBP3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 CDC37Q16543 378 aaPredicted RBP3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 NTRK2Q16620 822 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 MEA1Q16626 185 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 MTHFSDQ2M296 383 aaKnown RBP3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 PRR27Q6MZM9 219 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 CTR9Q6PD62 1173 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 IL17RELQ6ZVW7 336 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 MCUQ8NE86 351 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 CFAP61Q8NHU2 1237 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 LRRC15Q8TF66 581 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 PRPF31Q8WWY3 499 aaKnown RBP3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 NXNL1Q96CM4 212 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 C4orf45Q96LM5 186 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 TIGD1Q96MW7 591 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 GAL3ST4Q96RP7 486 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 OVOL2Q9BRP0 275 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 FAM49AQ9H0Q0 323 aaPredicted RBP3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 PDE7BQ9NP56 450 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 TBC1D22BQ9NU19 505 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 TEX10Q9NXF1 929 aaPredicted RBP3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 VPS28Q9UK41 221 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 ISY1Q9ULR0 285 aaKnown RBP3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 WDR83OSQ9Y284 106 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 CEP164Q9UPV0 1460 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 AK9Q5TCS8 1911 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 KDM5BQ9UGL1 1544 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 PTPRGP23470 1445 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 CEP162Q5TB80 1403 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 SPAG9O60271 1321 aaKnown RBP3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 IL16Q14005 1332 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 SYNRGQ9UMZ2 1314 aa3.19□□□□□ -1.9
AC009961.3-201ENST00000449832 ANKRD18BA2A2Z9 1011 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 H0YAE9 185 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 O00370 1275 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 TEX28O15482 410 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 TSPAN9O75954 239 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 PGM3O95394 542 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 LINGO3P0C6S8 592 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 DNAH10OSP0CZ25 163 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 PFKFB1P16118 471 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 MAPK12P53778 367 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 NAP1L1P55209 391 aaKnown RBP3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 CHAF1BQ13112 559 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 WTAPQ15007 396 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 SNAPC1Q16533 368 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 GPR33Q49SQ1 333 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 MCMDC2Q4G0Z9 681 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 CES4AQ5XG92 561 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 MFSD12Q6NUT3 480 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 CREBRFQ8IUR6 639 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 LGI2Q8N0V4 545 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 ABHD12Q8N2K0 398 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 POM121L12Q8N7R1 296 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 THOC1Q96FV9 657 aaKnown RBP3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 RSRC1Q96IZ7 334 aaKnown RBP3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 SLC45A3Q96JT2 553 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 LPAR4Q99677 370 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 OLAHQ9NV23 265 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 KIF3AQ9Y496 699 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 AKNAQ7Z591 1439 aa3.18□□□□□ -1.9
AC009961.3-201ENST00000449832 NCOA3Q9Y6Q9 1424 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms