RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 UROSP10746 265 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 TEKQ02763 1124 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 MVKQ03426 396 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 ATP6AP1LQ52LC2 224 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 ARMCX4Q5H9R4 360 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 BLOC1S3Q6QNY0 202 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 B3GNT8Q7Z7M8 397 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 SPATA22Q8NHS9 363 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZNF578Q96N58 590 aaPredicted RBP13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 SERPINB11Q96P15 392 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 RBM4BQ9BQ04 359 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 SLC30A2Q9BRI3 323 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 RBM4Q9BWF3 364 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 NIPAL2Q9H841 368 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 SLC12A8A0AV02 714 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 BCKDKO14874 412 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 SLC22A5O76082 557 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 RHOBTB1O94844 696 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 FGF1P05230 155 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 HOXD4P09016 255 aaPredicted RBP13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 MYL9P24844 172 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 GNPDA1P46926 289 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 RAPSNQ13702 412 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 IRF3Q14653 427 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 RBBP7Q16576 425 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 LEXMQ3ZCV2 418 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 SETMARQ53H47 684 aaPredicted RBP13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 RBM20Q5T481 1227 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZBTB37Q5TC79 503 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 PAMR1Q6UXH9 720 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 RPS27LQ71UM5 84 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 PJA1Q8NG27 643 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 MAGEB10Q96LZ2 347 aaPredicted RBP13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 RHNO1Q9BSD3 238 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 CCNB1IP1Q9NPC3 277 aa13.1□□□□□ -0.31
SYNGAP1-204ENST00000449372 AGRPO00253 132 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 PIP5K1BO14986 540 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 EEDO75530 441 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 C1QBP02746 253 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 ALDOCP09972 364 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 GADD45AP24522 165 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 AKT1P31749 480 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 LIPAP38571 399 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 MRPL19P49406 292 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 BTN1A1Q13410 526 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 NOMO2Q5JPE7 1267 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 FAM219BQ5XKK7 198 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 CLEC6AQ6EIG7 209 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 SPESP1Q6UW49 350 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 RANBP10Q6VN20 620 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZNF600Q6ZNG1 722 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZNF683Q8IZ20 524 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 LILRB2Q8N423 598 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 PTERQ96BW5 349 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 ITPAQ9BY32 194 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 RNF6Q9Y252 685 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 ANKRD12Q6UB98 2062 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 NDUFS3O75489 264 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 OR4Q2P0C623 313 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 KELP23276 732 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 HAAOP46952 286 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 APLP1P51693 650 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 POLR2JP52435 117 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 NRG1Q02297 640 aaPredicted RBP13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 TCTN1Q2MV58 587 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 CCDC190Q86UF4 302 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 CILP2Q8IUL8 1156 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 DNAJB8Q8NHS0 232 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 FRS2Q8WU20 508 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 FATE1Q969F0 183 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 ACOX2Q99424 681 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 FAM83DQ9H4H8 585 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 RIMKLBQ9ULI2 386 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 INVSQ9Y283 1065 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 VPS26AO75436 327 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 HRH2P25021 359 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 ETV6P41212 452 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 PPP1R8Q12972 351 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 COL4A6Q14031 1691 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 TAB1Q15750 504 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 UNC50Q53HI1 259 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 HDDC2Q7Z4H3 204 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 RTL3Q8N8U3 475 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 DNAJA4Q8WW22 397 aaPredicted RBP13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 ST8SIA2Q92186 375 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 CAPNS2Q96L46 248 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 B3GALT6Q96L58 329 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 TMEM74Q96NL1 305 aa13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 TNPO3Q9Y5L0 923 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-204ENST00000449372 OR2A25A4D2G3 310 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 NBNO60934 754 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 MT-CYBP00156 380 aaPredicted RBP13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 ITGALP20701 1170 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 PRKACGP22612 351 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 CA5AP35218 305 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 CTSKP43235 329 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 MAGEA11P43364 429 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 ERVK-8P63133 956 aa13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 ALDH6A1Q02252 535 aaKnown RBP13.08□□□□□ -0.31
SYNGAP1-204ENST00000449372 PFKFB4Q16877 469 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms