RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 AMZ1Q400G9 498 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 TCHHL1Q5QJ38 904 aaPredicted RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 NKAIN2Q5VXU1 208 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 CGB2Q6NT52 195 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 IRGCQ6NXR0 463 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 KLHL35Q6PF15 583 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 SLCO4C1Q6ZQN7 724 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 AFAP1L2Q8N4X5 818 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 METTL6Q8TCB7 284 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 AHCYL2Q96HN2 611 aaKnown RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 PPP1R36Q96LQ0 422 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 HAO1Q9UJM8 370 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 KLHL20Q9Y2M5 609 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 HCN4Q9Y3Q4 1203 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 PCDHGB2Q9Y5G2 931 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 U3KQA8 63 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 RIF1Q5UIP0 2472 aaKnown RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 H7BY64 318 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 FLRT2O43155 660 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 LRP3O75074 770 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 CCNDBP1O95273 360 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 TROVE2P10155 538 aaKnown RBP eCLIP14.09□□□□□ -0.15
TNF-208ENST00000449264 CD22P20273 847 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 EPHA4P54764 986 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 PRDX1Q06830 199 aaKnown RBP14.09□□□□□ -0.15
TNF-208ENST00000449264 SLBPQ14493 270 aaKnown RBP eCLIP14.09□□□□□ -0.15
TNF-208ENST00000449264 KANK2Q63ZY3 851 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 SPESP1Q6UW49 350 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 NXPE4Q6UWF7 544 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 EFL1Q7Z2Z2 1120 aaKnown RBP14.09□□□□□ -0.15
TNF-208ENST00000449264 GRAMD1AQ96CP6 724 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 PRAP1Q96NZ9 151 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 OR2A14Q96R47 310 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 TRIM55Q9BYV6 548 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 SLC6A20Q9NP91 592 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 TRPS1Q9UHF7 1281 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 DCTN4Q9UJW0 460 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 BTRCQ9Y297 605 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 ENTPD2Q9Y5L3 495 aa14.09□□□□□ -0.15
TNF-208ENST00000449264 IGHV1OR21-1A0A087WYE8 117 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 DUX1O43812 170 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 WFS1O76024 890 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 ENO1P06733 434 aaKnown RBP14.08□□□□□ -0.16
TNF-208ENST00000449264 C1GALT1C1LP0DN25 315 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 UROSP10746 265 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 GPR3P46089 330 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 CCR8P51685 355 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 PROX2Q3B8N5 592 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 GGTA1PQ4G0N0 100 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 PERM1Q5SV97 790 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 KIAA1614Q5VZ46 1190 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 ATG9BQ674R7 924 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 GRHL2Q6ISB3 625 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 SPRED1Q7Z699 444 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 WDR75Q8IWA0 830 aaKnown RBP14.08□□□□□ -0.16
TNF-208ENST00000449264 CLYBLQ8N0X4 340 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 L3MBTL4Q8NA19 623 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 OR6C4Q8NGE1 309 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 FLVCR1-AS1Q8TAF5 88 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 RHBDD1Q8TEB9 315 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 TWIST2Q8WVJ9 160 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 NCSTNQ92542 709 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 PTCD3Q96EY7 689 aaKnown RBP14.08□□□□□ -0.16
TNF-208ENST00000449264 CNDP2Q96KP4 475 aaKnown RBP14.08□□□□□ -0.16
TNF-208ENST00000449264 PPM1MQ96MI6 270 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 CCT8L2Q96SF2 557 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 HBEGFQ99075 208 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 ELAC2Q9BQ52 826 aaKnown RBP14.08□□□□□ -0.16
TNF-208ENST00000449264 DPH7Q9BTV6 452 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 KLHL25Q9H0H3 589 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 SPNS1Q9H2V7 528 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 SYNDIG1Q9H7V2 258 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 USH1CQ9Y6N9 552 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 SPEGQ15772 3267 aa14.08□□□□□ -0.16
TNF-208ENST00000449264 IGKV1-8A0A0C4DH67 115 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 A0A0G2JND7 137 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 EME2A4GXA9 379 aaPredicted RBP14.07□□□□□ -0.16
TNF-208ENST00000449264 SRRM3A6NNA2 597 aaPredicted RBP14.07□□□□□ -0.16
TNF-208ENST00000449264 C4orf47A7E2U8 309 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 MATN2O00339 956 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 HGSO14964 777 aaPredicted RBP14.07□□□□□ -0.16
TNF-208ENST00000449264 CASC3O15234 703 aaKnown RBP14.07□□□□□ -0.16
TNF-208ENST00000449264 NRP2O60462 931 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 UGDHO60701 494 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 CHEK2O96017 543 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 JUNP05412 331 aaKnown RBP14.07□□□□□ -0.16
TNF-208ENST00000449264 JUPP14923 745 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 MAGP20916 626 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 HTR6P50406 440 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 AQP5P55064 265 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 GFERP55789 205 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 ABATP80404 500 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 ZRSR2Q15696 482 aaKnown RBP14.07□□□□□ -0.16
TNF-208ENST00000449264 SGO1Q5FBB7 561 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 PAGE2BQ5JRK9 111 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 LIPJQ5W064 366 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 FAM92BQ6ZTR7 304 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 DDIASQ8IXT1 998 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 KIRREL3Q8IZU9 778 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms