RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 NKAPQ8N5F7 415 aaKnown RBP13.98□□□□□ -0.17
USP39-206ENST00000448971 OR2A1Q8NGT9 310 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 APOBEC4Q8WW27 367 aaKnown RBP13.98□□□□□ -0.17
USP39-206ENST00000448971 STARD8Q92502 1023 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 MR1Q95460 341 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 TSPAN17Q96FV3 270 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 CHRNA10Q9GZZ6 450 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 CAB39LQ9H9S4 337 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 PARVBQ9HBI1 364 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 MRPS30Q9NP92 439 aaKnown RBP13.98□□□□□ -0.17
USP39-206ENST00000448971 PADI1Q9ULC6 663 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 PDE10AQ9Y233 779 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 PLAAQ9Y263 795 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 PCDHGA10Q9Y5H3 936 aa13.98□□□□□ -0.17
USP39-206ENST00000448971 MYO9AB2RTY4 2548 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 ITPR2Q14571 2701 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 NPEPPSL1A6NEC2 478 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 E7ENX8 843 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 ZNF749O43361 778 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 HCRTR1O43613 425 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 PRICKLE3O43900 615 aaPredicted RBP13.97□□□□□ -0.17
USP39-206ENST00000448971 KATNA1O75449 491 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 KLK3P07288 261 aaPredicted RBP13.97□□□□□ -0.17
USP39-206ENST00000448971 HBQ1P09105 142 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 SPRP35270 261 aaPredicted RBP13.97□□□□□ -0.17
USP39-206ENST00000448971 GRIA3P42263 894 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 GABRA4P48169 554 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 CD97P48960 835 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 POU4F1Q01851 419 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 TAP2Q03519 686 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 DNASE1L3Q13609 305 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 USP10Q14694 798 aaKnown RBP13.97□□□□□ -0.17
USP39-206ENST00000448971 PHKG1Q16816 387 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 DEFB109BQ30KR1 87 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 PRAMEF13Q5VWM6 474 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 ICE2Q659A1 982 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 FCRL6Q6DN72 434 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 FRA10AC1Q70Z53 315 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 CYS1Q717R9 158 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 FAM26EQ8N5C1 309 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 CT55Q8WUE5 264 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 DLG3Q92796 817 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 MIB2Q96AX9 1013 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 ALKBH8Q96BT7 664 aaKnown RBP13.97□□□□□ -0.17
USP39-206ENST00000448971 CCDC138Q96M89 665 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 DPH7Q9BTV6 452 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 TRIM54Q9BYV2 358 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 TSPYL1Q9H0U9 437 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 CDC42EP4Q9H3Q1 356 aaKnown RBP13.97□□□□□ -0.17
USP39-206ENST00000448971 POPDC3Q9HBV1 291 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 SLC6A20Q9NP91 592 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 TXLNGQ9NUQ3 528 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 ARL15Q9NXU5 204 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 UTP6Q9NYH9 597 aaKnown RBP13.97□□□□□ -0.17
USP39-206ENST00000448971 EURLQ9NYK6 297 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 NINJ2Q9NZG7 142 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 STOX2Q9P2F5 926 aaPredicted RBP13.97□□□□□ -0.17
USP39-206ENST00000448971 SRPK3Q9UPE1 567 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 MTO1Q9Y2Z2 717 aaKnown RBP13.97□□□□□ -0.17
USP39-206ENST00000448971 CREBBPQ92793 2442 aa13.97□□□□□ -0.17
USP39-206ENST00000448971 A0A0J9YVX5 310 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 K7EM74 188 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 PHGDHO43175 533 aaKnown RBP13.96□□□□□ -0.17
USP39-206ENST00000448971 NRP2O60462 931 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 GUCA1CO95843 209 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 ENO2P09104 434 aaPredicted RBP13.96□□□□□ -0.17
USP39-206ENST00000448971 NUDT7P0C024 238 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 RHOXF2BP0C7M4 288 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 STMN1P16949 149 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 TCN2P20062 427 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 F8A1P23610 371 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 AP1S2P56377 157 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 UAP1Q16222 522 aaPredicted RBP13.96□□□□□ -0.17
USP39-206ENST00000448971 PTCHD3Q3KNS1 767 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 ATP1A1-AS1Q5TC04 95 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 GRTP1Q5TC63 336 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 TLDC1Q6P9B6 456 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 FAM199XQ6PEV8 388 aaPredicted RBP13.96□□□□□ -0.17
USP39-206ENST00000448971 AGTRAPQ6RW13 159 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 CEP97Q8IW35 865 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 DNAJC22Q8N4W6 341 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 ZNF655Q8N720 491 aaPredicted RBP13.96□□□□□ -0.17
USP39-206ENST00000448971 TTC29Q8NA56 475 aaPredicted RBP13.96□□□□□ -0.17
USP39-206ENST00000448971 ZUFSPQ96AP4 578 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 MRRFQ96E11 262 aaKnown RBP13.96□□□□□ -0.17
USP39-206ENST00000448971 LRFN5Q96NI6 719 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 GPR22Q99680 433 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 SELENOSQ9BQE4 189 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 RHOXF2Q9BQY4 288 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 MCMBPQ9BTE3 642 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 NDC1Q9BTX1 674 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 SPRTNQ9H040 489 aaPredicted RBP13.96□□□□□ -0.17
USP39-206ENST00000448971 ATG10Q9H0Y0 220 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 PCMTD2Q9NV79 361 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 KCND3Q9UK17 655 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 MRPS18BQ9Y676 258 aaKnown RBP13.96□□□□□ -0.17
USP39-206ENST00000448971 AP1M2Q9Y6Q5 423 aa13.96□□□□□ -0.17
USP39-206ENST00000448971 CENPEQ02224 2701 aa13.96□□□□□ -0.18
USP39-206ENST00000448971 TARM1B6A8C7 271 aa13.95□□□□□ -0.18
USP39-206ENST00000448971 C21orf140B9A014 251 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms