RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 MSANTD1Q6ZTZ1 278 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 MOB2Q70IA6 237 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 TTLQ8NG68 377 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 TMEM74Q96NL1 305 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 MMP27Q9H306 513 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 TRIM36Q9NQ86 728 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 HPF1Q9NWY4 346 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 LYARQ9NX58 379 aaKnown RBP7.59□□□□□ -1.19
NEDD9-204ENST00000448183 ZDHHC3Q9NYG2 299 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 RDH8Q9NYR8 311 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 SEC14L4Q9UDX3 406 aa7.59□□□□□ -1.19
NEDD9-204ENST00000448183 FXYD6-FXYD2A0A087WZ82 144 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 TRIM64CA6NLI5 447 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 L7N2F9 121 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 B3GALT2O43825 422 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 TYROBPO43914 113 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 TM4SF1P30408 202 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 MAGEA12P43365 314 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 CLCN7P51798 805 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 SP3Q02447 781 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 SLC25A11Q02978 314 aaKnown RBP7.59□□□□□ -1.2
NEDD9-204ENST00000448183 DNASE1L3Q13609 305 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 SMU1Q2TAY7 513 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 ZNF782Q6ZMW2 699 aaPredicted RBP7.59□□□□□ -1.2
NEDD9-204ENST00000448183 TMEM17Q86X19 198 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 FAM129CQ86XR2 697 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 C1orf52Q8N6N3 182 aaKnown RBP7.59□□□□□ -1.2
NEDD9-204ENST00000448183 ZNF431Q8TF32 576 aaPredicted RBP7.59□□□□□ -1.2
NEDD9-204ENST00000448183 METTL21AQ8WXB1 218 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 ACDQ96AP0 544 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 ISOC1Q96CN7 298 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 COQ8BQ96D53 544 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 RPL10LQ96L21 214 aaKnown RBP7.59□□□□□ -1.2
NEDD9-204ENST00000448183 SIGLEC10Q96LC7 697 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 BARD1Q99728 777 aaKnown RBP7.59□□□□□ -1.2
NEDD9-204ENST00000448183 RAB11FIP5Q9BXF6 653 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 FXYD6Q9H0Q3 95 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 TRPV4Q9HBA0 871 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 CHMP1AQ9HD42 196 aaPredicted RBP7.59□□□□□ -1.2
NEDD9-204ENST00000448183 TM9SF3Q9HD45 589 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 GDAP2Q9NXN4 497 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 PCDHGB6Q9Y5F9 930 aa7.59□□□□□ -1.2
NEDD9-204ENST00000448183 ILVBLA1L0T0 632 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 ZSCAN5BA6NJL1 495 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 ELOA3DA6NLF2 546 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-204ENST00000448183 DLGAP1O14490 977 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 PPEF2O14830 753 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 GMFGO60234 142 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 CDC40O60508 579 aaKnown RBP eCLIP7.58□□□□□ -1.2
NEDD9-204ENST00000448183 CYB5AP00167 134 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 GSTT2P0CG29 244 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 ZNF3P17036 446 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 AHCYP23526 432 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 HSD17B2P37059 387 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 MASP1P48740 699 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 TMBIM6P55061 237 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 GAD2Q05329 585 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 ARFRP1Q13795 201 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 PUM1Q14671 1186 aaKnown RBP eCLIP7.58□□□□□ -1.2
NEDD9-204ENST00000448183 TGFBIQ15582 683 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 ELOA3BQ3SY89 546 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 ATAT1Q5SQI0 421 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 SNAP47Q5SQN1 464 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 SLC8B1Q6J4K2 584 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 PYHIN1Q6K0P9 492 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 PRR23CQ6ZRP0 262 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 PAQR7Q86WK9 346 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 NXPE1Q8N323 547 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 CPA6Q8N4T0 437 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 ARL14EPQ8N8R7 260 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-204ENST00000448183 ELOA3Q8NG57 546 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 OR14C36Q8NHC7 312 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 SCAMP5Q8TAC9 235 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 BPIFB1Q8TDL5 484 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 HDAC2Q92769 488 aaKnown RBP7.58□□□□□ -1.2
NEDD9-204ENST00000448183 RNF38Q9H0F5 515 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 FAM120CQ9NX05 1096 aaKnown RBP7.58□□□□□ -1.2
NEDD9-204ENST00000448183 CDC7O00311 574 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 SAP18O00422 153 aaKnown RBP7.58□□□□□ -1.2
NEDD9-204ENST00000448183 UBXN7O94888 489 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 RCBTB2O95199 551 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 KAT7O95251 611 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 RASGRP1O95267 797 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 RAB36O95755 333 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 AGR2O95994 175 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 TGFB1P01137 390 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 G6PDP11413 515 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 SELPP16109 830 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 ALAS2P22557 587 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 APLP1P51693 650 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 ZNF45Q02386 682 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 SIRPB2Q5JXA9 342 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 ZNF627Q7L945 461 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 OR4F6Q8NGB9 312 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 C2orf15Q8WU43 125 aaKnown RBP7.58□□□□□ -1.2
NEDD9-204ENST00000448183 TSPEARQ8WU66 669 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 HSH2DQ96JZ2 352 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 GAL3ST4Q96RP7 486 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 AIFM2Q9BRQ8 373 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 NDC1Q9BTX1 674 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms