RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ARMC6Q6NXE6 501 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 ARHGAP11AQ6P4F7 1023 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 TLDC1Q6P9B6 456 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 WDR53Q7Z5U6 358 aaPredicted RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 ADGRG6Q86SQ4 1221 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 FAM131BQ86XD5 332 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 BEST3Q8N1M1 668 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 UMODL1-AS1Q8N2C9 162 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 AMER2Q8N7J2 671 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 PDILTQ8N807 584 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 RTL3Q8N8U3 475 aaKnown RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 FAM98AQ8NCA5 519 aaKnown RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 OR5M3Q8NGP4 307 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 OR10Q1Q8NGQ4 319 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 LINC01560Q8TB33 94 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 TBC1D31Q96DN5 1066 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 ZBED6CLQ96FA7 236 aaPredicted RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 MCMBPQ9BTE3 642 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 MAGEB5Q9BZ81 275 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 OR2AG1Q9H205 316 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 METTL5Q9NRN9 209 aaKnown RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 ZNF701Q9NV72 531 aaPredicted RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 SLC24A2Q9UI40 661 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 CMYA5Q8N3K9 4069 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 MATN2O00339 956 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 STX10O60499 249 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 MATN4O95460 622 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 CD3EP07766 207 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 SP1P08047 785 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 POLR2CP19387 275 aaPredicted RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 PSMC2P35998 433 aaKnown RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 HALP42357 657 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 KCNC1P48547 511 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 RAB28P51157 221 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 SCNN1BP51168 640 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 SORDQ00796 357 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 TAP2Q03519 686 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 KLC1Q07866 573 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 TRAF2Q12933 501 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 ACKR1Q16570 336 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 GXYLT1Q4G148 440 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 TFDP3Q5H9I0 405 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 H3F3CQ6NXT2 135 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 FBXO42Q6P3S6 717 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 CNSTQ6PJW8 725 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 B3GNT6Q6ZMB0 384 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 LRRTM4Q86VH4 590 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 PIH1D2Q8WWB5 315 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 ZNF606Q8WXB4 792 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 SLCO2A1Q92959 643 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 YIPF4Q9BSR8 244 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 CRB3Q9BUF7 120 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 LRRC19Q9H756 370 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 KIR3DX1Q9H7L2 352 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 TRIM39Q9HCM9 518 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 FBLN5Q9UBX5 448 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 TEKT2Q9UIF3 430 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 LIMCH1Q9UPQ0 1083 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 MORC2Q9Y6X9 1032 aaPredicted RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 YLPM1P49750 1951 aaKnown RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 ARHGAP21Q5T5U3 1957 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 SCN2AQ99250 2005 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 LOC102723996A0A087X1L8 192 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 A0A1B0GX78 115 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 CALUO43852 315 aaPredicted RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 KLRC4O43908 158 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 NME2P1O60361 137 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 PGLSO95336 258 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 PIM1P11309 404 aaPredicted RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 MTHFD1P11586 935 aaKnown RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 NR0B1P51843 470 aaKnown RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 NEK4P51957 841 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 AP2B1P63010 937 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 LRMPQ12912 555 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 TCEAL1Q15170 157 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 ZIC1Q15915 447 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 DEFB110Q30KQ9 67 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 RAB6CQ53S08 254 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 ACER2Q5QJU3 275 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 RIPPLY2Q5TAB7 128 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 SLC25A25Q6KCM7 469 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 PAF1Q8N7H5 531 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 C1orf131Q8NDD1 294 aaKnown RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 IMMP1LQ96LU5 166 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 ZNF396Q96N95 335 aaPredicted RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 SMIM14Q96QK8 99 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 PSKH2Q96QS6 385 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 NPAS2Q99743 824 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 RAB6CQ9H0N0 254 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 METTL14Q9HCE5 456 aaKnown RBP3.06□□□□□ -1.92
PMS1-215ENST00000447232 ARFGAP3Q9NP61 516 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 PNPLA3Q9NST1 481 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 RIC8BQ9NVN3 520 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 DTLQ9NZJ0 730 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 TRIM10Q9UDY6 481 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 CLIC4Q9Y696 253 aa3.06□□□□□ -1.92
PMS1-215ENST00000447232 EIF3CLB5ME19 914 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms