RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 GRSF1Q12849 480 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNX13-204ENST00000444712 DDX39BQ13838 428 aaKnown RBP15.16■□□□□ 0.02
SNX13-204ENST00000444712 TMEM259Q4ZIN3 620 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 PRAMEF14Q5SWL7 426 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 LRIF1Q5T3J3 769 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 PRAMEF13Q5VWM6 474 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 USP30Q70CQ3 517 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 TICAM1Q8IUC6 712 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 SPPL2CQ8IUH8 684 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 RIMKLAQ8IXN7 391 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 LAS2Q8IYD9 372 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 LRRC56Q8IYG6 542 aaPredicted RBP15.16■□□□□ 0.02
SNX13-204ENST00000444712 IL17RCQ8NAC3 791 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 CLHC1Q8NHS4 586 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 DNASE1L2Q92874 299 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 SLCO4A1Q96BD0 722 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 PPWD1Q96BP3 646 aaKnown RBP15.16■□□□□ 0.02
SNX13-204ENST00000444712 MTERF1Q99551 399 aaKnown RBP15.16■□□□□ 0.02
SNX13-204ENST00000444712 LGR4Q9BXB1 951 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 SLC17A9Q9BYT1 436 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 PCBD2Q9H0N5 130 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 TRIT1Q9H3H1 467 aaKnown RBP15.16■□□□□ 0.02
SNX13-204ENST00000444712 PRM3Q9NNZ6 103 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 MBNL1Q9NR56 388 aaKnown RBP15.16■□□□□ 0.02
SNX13-204ENST00000444712 RNGTTO60942 597 aaKnown RBP15.15■□□□□ 0.02
SNX13-204ENST00000444712 KLF8O95600 359 aaPredicted RBP15.15■□□□□ 0.02
SNX13-204ENST00000444712 PAK4O96013 591 aaPredicted RBP15.15■□□□□ 0.02
SNX13-204ENST00000444712 ERGP11308 486 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 CYP4F3Q08477 520 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 MED21Q13503 144 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 TSTA3Q13630 321 aaPredicted RBP15.15■□□□□ 0.02
SNX13-204ENST00000444712 BLMHQ13867 455 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 COL19A1Q14993 1142 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 AAK1Q2M2I8 961 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 TBCELQ5QJ74 424 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 THEMIS2Q5TEJ8 643 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 ANO7Q6IWH7 933 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 KIAA1211LQ6NV74 962 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 NXPE4Q6UWF7 544 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 ERMP1Q7Z2K6 904 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 HORMAD1Q86X24 394 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 HUS1BQ8NHY5 278 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 CANT1Q8WVQ1 401 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 EME1Q96AY2 570 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 ABHD8Q96I13 439 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 CCDC115Q96NT0 180 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 HHIPQ96QV1 700 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 MKRN2Q9H000 416 aaKnown RBP15.15■□□□□ 0.02
SNX13-204ENST00000444712 VAPAQ9P0L0 249 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 CIDEBQ9UHD4 219 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 RAB26Q9ULW5 256 aa15.15■□□□□ 0.02
SNX13-204ENST00000444712 A0A1W2PQU0 124 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 MAGEA13PA6NCF6 341 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 EGFP01133 1207 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 KIR3DL1P43629 444 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 ADPRHP54922 357 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 MTAPQ13126 283 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 CYP2A13Q16696 494 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 RUNDC3AQ59EK9 446 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 TBC1D21Q8IYX1 336 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 KRT78Q8N1N4 520 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 NELL1Q92832 810 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 NSMCE2Q96MF7 247 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 GBP5Q96PP8 586 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 C8orf4Q9NR00 106 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 FAM120CQ9NX05 1096 aaKnown RBP15.14■□□□□ 0.01
SNX13-204ENST00000444712 SIRT5Q9NXA8 310 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 ADGRE2Q9UHX3 823 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 CD207Q9UJ71 328 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 PPT2Q9UMR5 302 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 PRKAB1Q9Y478 270 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 MAGEB17A8MXT2 336 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 CACNB4O00305 520 aaPredicted RBP15.14■□□□□ 0.01
SNX13-204ENST00000444712 AKAP10O43572 662 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 DFNA5O60443 496 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 C7P10643 843 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 PIK3CBP42338 1070 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 TRPC1P48995 793 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 MTPNP58546 118 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 LRRC74AQ0VAA2 488 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 SLBPQ14493 270 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNX13-204ENST00000444712 PON2Q15165 354 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 CYP51A1Q16850 503 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 OR5AR1Q8NGP9 310 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 LRTOMTQ8WZ04 291 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 CXorf40BQ96DE9 158 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 C11orf24Q96F05 449 aaPredicted RBP15.14■□□□□ 0.01
SNX13-204ENST00000444712 PRPF18Q99633 342 aaKnown RBP15.14■□□□□ 0.01
SNX13-204ENST00000444712 THUMPD3Q9BV44 507 aaKnown RBP15.14■□□□□ 0.01
SNX13-204ENST00000444712 GMPR2Q9P2T1 348 aaKnown RBP15.14■□□□□ 0.01
SNX13-204ENST00000444712 SLC23A2Q9UGH3 650 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 ANAPC2Q9UJX6 822 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 AURKCQ9UQB9 309 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 OR1A2Q9Y585 309 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 PIAS3Q9Y6X2 628 aa15.14■□□□□ 0.01
SNX13-204ENST00000444712 TRBV5-3A0A0A0MS03 114 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 A0A1W2PQF6 199 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 PIPSLA2A3N6 862 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 CCDC85CA6NKD9 419 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 ADAM23O75077 832 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms