RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 NUDT14O95848 222 aa10.31□□□□□ -0.76
TOP3B-210ENST00000444502 PPP2R1BP30154 601 aa10.31□□□□□ -0.76
TOP3B-210ENST00000444502 SLC7A1P30825 629 aa10.31□□□□□ -0.76
TOP3B-210ENST00000444502 PTGS2P35354 604 aa10.31□□□□□ -0.76
TOP3B-210ENST00000444502 UBE3AQ05086 875 aa10.31□□□□□ -0.76
TOP3B-210ENST00000444502 PDE12Q6L8Q7 609 aaKnown RBP10.31□□□□□ -0.76
TOP3B-210ENST00000444502 P3H2Q8IVL5 708 aa10.31□□□□□ -0.76
TOP3B-210ENST00000444502 UBE2E3Q969T4 207 aa10.31□□□□□ -0.76
TOP3B-210ENST00000444502 TP63Q9H3D4 680 aaPredicted RBP10.31□□□□□ -0.76
TOP3B-210ENST00000444502 ZNF576Q9H609 170 aa10.31□□□□□ -0.76
TOP3B-210ENST00000444502 ARNT2Q9HBZ2 717 aa10.31□□□□□ -0.76
TOP3B-210ENST00000444502 GMPR2Q9P2T1 348 aaKnown RBP10.31□□□□□ -0.76
TOP3B-210ENST00000444502 SNTNA6NMZ2 147 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 WASH4PA8MWX3 477 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 LOC730098B7Z3J9 87 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 TNFRSF10AO00220 468 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 SGTAO43765 313 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 CLDN9O95484 217 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 SGSHP51688 502 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 C1orf61Q13536 156 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 ELAVL3Q14576 367 aaKnown RBP10.3□□□□□ -0.76
TOP3B-210ENST00000444502 CLPPQ16740 277 aaPredicted RBP10.3□□□□□ -0.76
TOP3B-210ENST00000444502 INO80DQ53TQ3 878 aaPredicted RBP10.3□□□□□ -0.76
TOP3B-210ENST00000444502 SUSD1Q6UWL2 747 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 BHLHA9Q7RTU4 235 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 ZC3H7AQ8IWR0 971 aaKnown RBP10.3□□□□□ -0.76
TOP3B-210ENST00000444502 CNTN4Q8IWV2 1026 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 ITPKCQ96DU7 683 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 EQTNQ9NQ60 294 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 GMEB2Q9UKD1 530 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 CDH7Q9ULB5 785 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 PLAGL1Q9UM63 463 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 SLC22A14Q9Y267 594 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 RIF1Q5UIP0 2472 aaKnown RBP10.3□□□□□ -0.76
TOP3B-210ENST00000444502 LOC285095A0A1B0GVY8 99 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 DRGXA6NNA5 263 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 ARPC2O15144 300 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 EPN2O95208 641 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 SRCP12931 536 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 PIGGQ5H8A4 983 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 ZNF549Q6P9A3 640 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 GOLGA7Q7Z5G4 137 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 EID3Q8N140 333 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 GTPBP2Q9BX10 602 aaKnown RBP10.3□□□□□ -0.76
TOP3B-210ENST00000444502 TEX12Q9BXU0 123 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 EPB41L1Q9H4G0 881 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 MEAF6Q9HAF1 191 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 RC3H2Q9HBD1 1191 aaKnown RBP10.3□□□□□ -0.76
TOP3B-210ENST00000444502 PSME2Q9UL46 239 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 OAZ3Q9UMX2 235 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 EI24O14681 340 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 MID1O15344 667 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 OR10H2O60403 315 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 ATP1B2P14415 290 aaPredicted RBP10.3□□□□□ -0.76
TOP3B-210ENST00000444502 HTR6P50406 440 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 TUBB3Q13509 450 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 MINDY4Q4G0A6 757 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 ZNF805Q5CZA5 627 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 C6orf136Q5SQH8 315 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 NANOGP8Q6NSW7 305 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 LIMS2Q7Z4I7 341 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 PHOSPHO2Q8TCD6 241 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 PMEPA1Q969W9 287 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 VMP1Q96GC9 406 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 SLC38A3Q99624 504 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 MCMBPQ9BTE3 642 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 ZSCAN5AQ9BUG6 496 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 NUSAP1Q9BXS6 441 aaKnown RBP10.3□□□□□ -0.76
TOP3B-210ENST00000444502 TRIT1Q9H3H1 467 aaKnown RBP10.3□□□□□ -0.76
TOP3B-210ENST00000444502 ITM2CQ9NQX7 267 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 RNF11Q9Y3C5 154 aa10.3□□□□□ -0.76
TOP3B-210ENST00000444502 TCRBV21S2A2A0A5A6 115 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 NADKO95544 446 aaPredicted RBP10.29□□□□□ -0.76
TOP3B-210ENST00000444502 APOA1P02647 267 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 HOXD9P28356 352 aaPredicted RBP10.29□□□□□ -0.76
TOP3B-210ENST00000444502 BDKRB1P46663 353 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 CDKL1Q00532 357 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 PTGR1Q14914 329 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 FXNQ16595 210 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 AAK1Q2M2I8 961 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 ERN2Q76MJ5 926 aaKnown RBP10.29□□□□□ -0.76
TOP3B-210ENST00000444502 KBTBD6Q86V97 674 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 TBC1D21Q8IYX1 336 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 TMEM145Q8NBT3 493 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 KCNJ9Q92806 393 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 AIF1LQ9BQI0 150 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 MGME1Q9BQP7 344 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 PBX4Q9BYU1 374 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 RPRD1BQ9NQG5 326 aaKnown RBP10.29□□□□□ -0.76
TOP3B-210ENST00000444502 ZDHHC7Q9NXF8 308 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 APC2O95996 2303 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 IGLON5A6NGN9 336 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 A8MV72 311 aaPredicted RBP10.29□□□□□ -0.76
TOP3B-210ENST00000444502 TRBC1P01850 177 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 HLA-FP30511 346 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 TRIM71Q2Q1W2 868 aaKnown RBP10.29□□□□□ -0.76
TOP3B-210ENST00000444502 TMEM31Q5JXX7 168 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 MANEALQ5VSG8 457 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 HLA-DQA1Q5Y7H0 255 aa10.29□□□□□ -0.76
TOP3B-210ENST00000444502 GPR135Q8IZ08 494 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms