RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PABPN1LA6NDY0 278 aaKnown RBP19.18■□□□□ 0.66
LRCH3-208ENST00000443727 TTLL8A6PVC2 850 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 H0YGG7 62 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 DPM1O60762 260 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 AHSGP02765 367 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 C8GP07360 202 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 UMODP07911 640 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 ARF3P61204 181 aaPredicted RBP19.18■□□□□ 0.66
LRCH3-208ENST00000443727 FOXK1P85037 733 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 NKG7Q16617 165 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 MUM1Q2TAK8 710 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 DCAF10Q5QP82 559 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 HIBCHQ6NVY1 386 aaPredicted RBP19.18■□□□□ 0.66
LRCH3-208ENST00000443727 SHISA6Q6ZSJ9 500 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 PPP1R32Q7Z5V6 425 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 PAQR7Q86WK9 346 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 CNTN4Q8IWV2 1026 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 CSNK1A1LQ8N752 337 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 GPATCH11Q8N954 259 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 LRRC39Q96DD0 335 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 KRT12Q99456 494 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 NUDT9Q9BW91 350 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 SOX17Q9H6I2 414 aaPredicted RBP19.18■□□□□ 0.66
LRCH3-208ENST00000443727 ZNF304Q9HCX3 659 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 ENAMQ9NRM1 1142 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 STOX2Q9P2F5 926 aaPredicted RBP19.18■□□□□ 0.66
LRCH3-208ENST00000443727 CTSFQ9UBX1 484 aa19.18■□□□□ 0.66
LRCH3-208ENST00000443727 FER1L5A0AVI2 2057 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 EFCAB8A8MWE9 144 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 SEC31AO94979 1220 aaKnown RBP19.17■□□□□ 0.66
LRCH3-208ENST00000443727 ONECUT2O95948 504 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 EZRP15311 586 aaKnown RBP19.17■□□□□ 0.66
LRCH3-208ENST00000443727 GABRB3P28472 473 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 MLLT10P55197 1068 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 CDKN2DP55273 166 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 OCA2Q04671 838 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 PDAP1Q13442 181 aaKnown RBP19.17■□□□□ 0.66
LRCH3-208ENST00000443727 NADK2Q4G0N4 442 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 RBM20Q5T481 1227 aaKnown RBP19.17■□□□□ 0.66
LRCH3-208ENST00000443727 PRMT9Q6P2P2 845 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 PAQR3Q6TCH7 311 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 ANKMY2Q8IV38 441 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 DTWD1Q8N5C7 304 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 LINGO1Q96FE5 620 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 CCDC138Q96M89 665 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 SLC26A1Q9H2B4 701 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 CCDC177Q9NQR7 707 aaPredicted RBP19.17■□□□□ 0.66
LRCH3-208ENST00000443727 SLC17A6Q9P2U8 582 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 PLAAQ9Y263 795 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 MED13Q9UHV7 2174 aa19.17■□□□□ 0.66
LRCH3-208ENST00000443727 IGKV1-8A0A0C4DH67 115 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 AGPSO00116 658 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 KLHL41O60662 606 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 ALPPP05187 535 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 FBLP22087 321 aaKnown RBP19.16■□□□□ 0.66
LRCH3-208ENST00000443727 MMP11P24347 488 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 IMPA1P29218 277 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 IL2P60568 153 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 SP140Q13342 867 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 RBBP7Q16576 425 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 TEDDM1Q5T9Z0 273 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 VWA5B1Q5TIE3 1220 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 COX15Q7KZN9 410 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 GALNT7Q86SF2 657 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 ATCAYQ86WG3 371 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 HPS6Q86YV9 775 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 GALNT16Q8N428 558 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 EFCAB3Q8N7B9 438 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 NACC2Q96BF6 587 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 ALKBH8Q96BT7 664 aaKnown RBP19.16■□□□□ 0.66
LRCH3-208ENST00000443727 VPS50Q96JG6 964 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 YIPF2Q9BWQ6 316 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 MFRPQ9BY79 579 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 PARVBQ9HBI1 364 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 ATP13A2Q9NQ11 1180 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 ADAMTS6Q9UKP5 1117 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 CDC14AQ9UNH5 594 aa19.16■□□□□ 0.66
LRCH3-208ENST00000443727 NBASA2RRP1 2371 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 UBR5O95071 2799 aaPredicted RBP19.15■□□□□ 0.66
LRCH3-208ENST00000443727 H7BY64 318 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 TXNDC9O14530 226 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 NDC80O14777 642 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 HIST1H2AGP0C0S8 130 aaPredicted RBP19.15■□□□□ 0.66
LRCH3-208ENST00000443727 HIST1H2ADP20671 130 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 TIAL1Q01085 375 aaKnown RBP eCLIP19.15■□□□□ 0.66
LRCH3-208ENST00000443727 PDIA2Q13087 525 aaKnown RBP19.15■□□□□ 0.66
LRCH3-208ENST00000443727 PRTGQ2VWP7 1150 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 HECTD2Q5U5R9 776 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 ZNF425Q6IV72 752 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 TRMT10BQ6PF06 316 aaKnown RBP19.15■□□□□ 0.66
LRCH3-208ENST00000443727 TMEM151BQ8IW70 566 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 PRSS58Q8IYP2 241 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 HIST1H2AHQ96KK5 128 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 PRAP1Q96NZ9 151 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 SPSB2Q99619 263 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 HIST1H2AJQ99878 128 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 H2AFJQ9BTM1 129 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 PCBD2Q9H0N5 130 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 ZFATQ9P243 1243 aa19.15■□□□□ 0.66
LRCH3-208ENST00000443727 ZNF282Q9UDV7 671 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms