RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 STRA8Q7Z7C7 330 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 MRGPREQ86SM8 312 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 PAQR7Q86WK9 346 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 DTWD1Q8N5C7 304 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 CSNK1A1LQ8N752 337 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.14■□□□□ 0.81
CDKN3-204ENST00000442975 ALKBH8Q96BT7 664 aaKnown RBP20.14■□□□□ 0.81
CDKN3-204ENST00000442975 C16orf45Q96MC5 204 aaPredicted RBP20.14■□□□□ 0.81
CDKN3-204ENST00000442975 UTP6Q9NYH9 597 aaKnown RBP20.14■□□□□ 0.81
CDKN3-204ENST00000442975 WHRNQ9P202 907 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 STOX2Q9P2F5 926 aaPredicted RBP20.14■□□□□ 0.81
CDKN3-204ENST00000442975 PDE10AQ9Y233 779 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 MAU2Q9Y6X3 613 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 SPTBP11277 2137 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 HYKKA2RU49 373 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 FITM1A5D6W6 292 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 K7EM74 188 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 SUV39H1O43463 412 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 CNOT3O75175 753 aaKnown RBP20.13■□□□□ 0.81
CDKN3-204ENST00000442975 FDXRP22570 491 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 OR1D4P47884 311 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 ABATP80404 500 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 PRAMEF13Q5VWM6 474 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 ASB18Q6ZVZ8 466 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 OR2Y1Q8NGV0 311 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 PYROXD1Q8WU10 500 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 RERGQ96A58 199 aaPredicted RBP20.13■□□□□ 0.81
CDKN3-204ENST00000442975 CABS1Q96KC9 395 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 CCDC138Q96M89 665 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 PARVBQ9HBI1 364 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 SLC22A11Q9NSA0 550 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 CUEDC1Q9NWM3 386 aaPredicted RBP20.13■□□□□ 0.81
CDKN3-204ENST00000442975 VWA7Q9Y334 891 aa20.13■□□□□ 0.81
CDKN3-204ENST00000442975 UTP11Q9Y3A2 253 aaKnown RBP20.13■□□□□ 0.81
CDKN3-204ENST00000442975 H0YGG7 62 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 HAT1O14929 419 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 TSPAN12O95859 305 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 CD63P08962 238 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 PIM1P11309 404 aaPredicted RBP20.12■□□□□ 0.81
CDKN3-204ENST00000442975 EZRP15311 586 aaKnown RBP20.12■□□□□ 0.81
CDKN3-204ENST00000442975 PGDP52209 483 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 ARF3P61204 181 aaPredicted RBP20.12■□□□□ 0.81
CDKN3-204ENST00000442975 PHKG1Q16816 387 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 FAM214AQ32MH5 1076 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 TCTN3Q6NUS6 607 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 MRPL14Q6P1L8 145 aaKnown RBP20.12■□□□□ 0.81
CDKN3-204ENST00000442975 PLD3Q8IV08 490 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 LRRC56Q8IYG6 542 aaPredicted RBP20.12■□□□□ 0.81
CDKN3-204ENST00000442975 FKBP10Q96AY3 582 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 SLC25A23Q9BV35 468 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 RAB17Q9H0T7 212 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 ATG10Q9H0Y0 220 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 GRHL1Q9NZI5 618 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 CTSFQ9UBX1 484 aa20.12■□□□□ 0.81
CDKN3-204ENST00000442975 FAM95CA0A1B0GW59 222 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 A6NL46 340 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 PEX12O00623 359 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 SLC16A5O15375 505 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 PIAS1O75925 651 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 MED26O95402 600 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 HIST1H2AGP0C0S8 130 aaPredicted RBP20.11■□□□□ 0.81
CDKN3-204ENST00000442975 HIST1H2ADP20671 130 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 RRADP55042 308 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 CKAP4Q07065 602 aaKnown RBP20.11■□□□□ 0.81
CDKN3-204ENST00000442975 DUPD1Q68J44 220 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 ZNF425Q6IV72 752 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 FBXO42Q6P3S6 717 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 AGTRAPQ6RW13 159 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 SHISA6Q6ZSJ9 500 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 COX15Q7KZN9 410 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 SLC26A11Q86WA9 606 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 ZC3HC1Q86WB0 502 aaKnown RBP20.11■□□□□ 0.81
CDKN3-204ENST00000442975 CCDC25Q86WR0 208 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 TMEM151BQ8IW70 566 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 HIST1H2AHQ96KK5 128 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 C10orf90Q96M02 699 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 HIST1H2AJQ99878 128 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 H2AFJQ9BTM1 129 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 SYNPO2LQ9H987 977 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 ARL15Q9NXU5 204 aa20.11■□□□□ 0.81
CDKN3-204ENST00000442975 H7BY64 318 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 STATHP02808 62 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 PDGFAP04085 211 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 UMODP07911 640 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 PLTPP55058 493 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 NAE1Q13564 534 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 RAPSNQ13702 412 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 ZNF460Q14592 562 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 SSPNQ14714 243 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 MUM1Q2TAK8 710 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 HKDC1Q2TB90 917 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 PRTGQ2VWP7 1150 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 MED25Q71SY5 747 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 OVCH1Q7RTY7 1134 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 PPP1R32Q7Z5V6 425 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 TMEM102Q8N9M5 508 aaPredicted RBP20.1■□□□□ 0.81
CDKN3-204ENST00000442975 COL26A1Q96A83 441 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 PTERQ96BW5 349 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 PRAP1Q96NZ9 151 aa20.1■□□□□ 0.81
CDKN3-204ENST00000442975 EPN3Q9H201 632 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms