RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 NEK10Q6ZWH5 1172 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 OR9A1PQ8NGU1 263 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 SUN3Q8TAQ9 357 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.16□□□□□ -0.3
PTPRE-203ENST00000442830 HAS2Q92819 552 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 MOCOSQ96EN8 888 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 PLCD4Q9BRC7 762 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 DPH7Q9BTV6 452 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 KIFC1Q9BW19 673 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 TGIF2Q9GZN2 237 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 ZNF160Q9HCG1 818 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 MRPS30Q9NP92 439 aaKnown RBP13.16□□□□□ -0.3
PTPRE-203ENST00000442830 HOMER3Q9NSC5 361 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 TEKT2Q9UIF3 430 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 OSGIN2Q9Y236 505 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 CAPN6Q9Y6Q1 641 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 MAU2Q9Y6X3 613 aa13.16□□□□□ -0.3
PTPRE-203ENST00000442830 E5RI56 91 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 CRYABP02511 175 aaKnown RBP13.15□□□□□ -0.3
PTPRE-203ENST00000442830 EIF2S1P05198 315 aaKnown RBP13.15□□□□□ -0.3
PTPRE-203ENST00000442830 PRR35P0CG20 571 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 EMP2P54851 167 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 FOXL2P58012 376 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 ABATP80404 500 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 BASP1P80723 227 aaKnown RBP13.15□□□□□ -0.3
PTPRE-203ENST00000442830 GBX1Q14549 363 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 SHISA6Q6ZSJ9 500 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 MICALCLQ6ZW33 695 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 GSTA5Q7RTV2 222 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 DNAJB8Q8NHS0 232 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 INTS10Q9NVR2 710 aaKnown RBP13.15□□□□□ -0.3
PTPRE-203ENST00000442830 MARCH4Q9P2E8 410 aaPredicted RBP13.15□□□□□ -0.3
PTPRE-203ENST00000442830 KLHL42Q9P2K6 505 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 SUCOQ9UBS9 1254 aaKnown RBP13.15□□□□□ -0.3
PTPRE-203ENST00000442830 CSAG2Q9Y5P2 127 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 NFS1Q9Y697 457 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 SCN2AQ99250 2005 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 MYO7BQ6PIF6 2116 aa13.15□□□□□ -0.3
PTPRE-203ENST00000442830 A0A1W2PPV9 198 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 IDSB3KWA1 339 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 MYO1CO00159 1063 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 MASP2O00187 686 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 ALOX12BO75342 701 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 PSIP1O75475 530 aaKnown RBP13.14□□□□□ -0.31
PTPRE-203ENST00000442830 JRKO75564 520 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 WFS1O76024 890 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 HEXBP07686 556 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 COX6A1P12074 109 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 TPSB2P20231 275 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 HRH2P25021 359 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 PSMB5P28074 263 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 SOX11P35716 441 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 PRDX1Q06830 199 aaKnown RBP13.14□□□□□ -0.31
PTPRE-203ENST00000442830 SNX1Q13596 522 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 FAM53BQ14153 422 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 RPS6KA1Q15418 735 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 TPSAB1Q15661 275 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 LONRF1Q17RB8 773 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 KIAA0930Q6ICG6 404 aaPredicted RBP13.14□□□□□ -0.31
PTPRE-203ENST00000442830 FRMPD2BQ6IN97 320 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 LRRC8BQ6P9F7 803 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 LINC00696Q6ZRV3 163 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 LDB1Q86U70 411 aaPredicted RBP13.14□□□□□ -0.31
PTPRE-203ENST00000442830 TMEM139Q8IV31 216 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 METTL27Q8N6F8 245 aaPredicted RBP13.14□□□□□ -0.31
PTPRE-203ENST00000442830 CSNK1A1LQ8N752 337 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 FBXO15Q8NCQ5 510 aaPredicted RBP13.14□□□□□ -0.31
PTPRE-203ENST00000442830 OR1N1Q8NGS0 311 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 C1orf54Q8WWF1 131 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 NR4A3Q92570 626 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 LPGAT1Q92604 370 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 C10orf90Q96M02 699 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 BIRC8Q96P09 236 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 DRC3Q9H069 523 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 TRPC4Q9UBN4 977 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 C19orf25Q9UFG5 118 aaPredicted RBP13.14□□□□□ -0.31
PTPRE-203ENST00000442830 CIDEBQ9UHD4 219 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 SOX13Q9UN79 622 aa13.14□□□□□ -0.31
PTPRE-203ENST00000442830 LOC102723996A0A087X1L8 192 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 LOC105369274A0A096LPK9 316 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 IGHV1-45A0A0A0MS14 117 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 LOC102723532A0A0G2JNH3 316 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 H0YGG7 62 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 VAPBO95292 243 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 MLYCDO95822 493 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 ENO3P13929 434 aaPredicted RBP13.13□□□□□ -0.31
PTPRE-203ENST00000442830 CHRM3P20309 590 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 COL8A1P27658 744 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 CDC25BP30305 580 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 RPL22P35268 128 aaKnown RBP13.13□□□□□ -0.31
PTPRE-203ENST00000442830 SLC26A3P40879 764 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 TNFSF10P50591 281 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 ARF3P61204 181 aaPredicted RBP13.13□□□□□ -0.31
PTPRE-203ENST00000442830 RBPJQ06330 500 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 Q0VFX4 171 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 CTSL3PQ5NE16 218 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 C1QL3Q5VWW1 255 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 OR4N4Q8N0Y3 316 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 MCOLN3Q8TDD5 553 aa13.13□□□□□ -0.31
PTPRE-203ENST00000442830 METTL21AQ8WXB1 218 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms