RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 MIPEPQ99797 713 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 FAM167BQ9BTA0 163 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 CRB3Q9BUF7 120 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 YIPF2Q9BWQ6 316 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 TRIM54Q9BYV2 358 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 ZNF552Q9H707 407 aaPredicted RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 MKKSQ9NPJ1 570 aaPredicted RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 ZC3H7BQ9UGR2 993 aaKnown RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 TEKT2Q9UIF3 430 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 SLC5A6Q9Y289 635 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 SPTA1P02549 2419 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 PIKFYVEQ9Y2I7 2098 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 PIEZO2Q9H5I5 2752 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 A0A0J9YVX5 310 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 DYTNA2CJ06 578 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 VSTM2BA6NLU5 285 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 ZSCAN12O43309 604 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 TTC4O95801 387 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 EIF2S1P05198 315 aaKnown RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 HIST1H2AGP0C0S8 130 aaPredicted RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 TPBGLP0DKB5 382 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 ACPPP15309 386 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 EZRP15311 586 aaKnown RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 HIST1H2ADP20671 130 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 CCND1P24385 295 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 PEBP1P30086 187 aaKnown RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 GRK3P35626 688 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 PNLIPRP1P54315 467 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 PRDX1Q06830 199 aaKnown RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 GRB7Q14451 532 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 SEMA3AQ14563 771 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 LONRF1Q17RB8 773 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 PLEKHN1Q494U1 663 aaPredicted RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 CRB2Q5IJ48 1285 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 THEMIS2Q5TEJ8 643 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 RPUSD3Q6P087 351 aaKnown RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 CNSTQ6PJW8 725 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 Q6ZS92 163 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 RNF44Q7L0R7 432 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 NDUFAF7Q7L592 441 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 LDB1Q86U70 411 aaPredicted RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 CILP2Q8IUL8 1156 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 LRRC8AQ8IWT6 810 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 OR2A1Q8NGT9 310 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 PRR7Q8TB68 274 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 DNAJB14Q8TBM8 379 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 METTL21AQ8WXB1 218 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 KCNJ9Q92806 393 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 HIST1H2AHQ96KK5 128 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 C5orf34Q96MH7 638 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 RUNDC3BQ96NL0 473 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 HIST1H2AJQ99878 128 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 PLCD4Q9BRC7 762 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 H2AFJQ9BTM1 129 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 MENTQ9BUN1 341 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 TMEM184CQ9NVA4 438 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 SYBUQ9NX95 663 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 MARCH4Q9P2E8 410 aaPredicted RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 C19orf25Q9UFG5 118 aaPredicted RBP7.43□□□□□ -1.22
CD44-211ENST00000442151 FBXL4Q9UKA2 621 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 CRYL1Q9Y2S2 319 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 DHRS7Q9Y394 339 aa7.43□□□□□ -1.22
CD44-211ENST00000442151 NSG1A0A0A6YYJ2 146 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 OR2A25A4D2G3 310 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 ANKUB1A6NFN9 424 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 MYO1CO00159 1063 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 SLC16A5O15375 505 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 SIAH2O43255 324 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 KIF5CO60282 957 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 PSIP1O75475 530 aaKnown RBP7.42□□□□□ -1.22
CD44-211ENST00000442151 MLYCDO95822 493 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 C8GP07360 202 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 HEXBP07686 556 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 ZGLP1P0C6A0 271 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 IL10P22301 178 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 TSFMP43897 325 aaKnown RBP7.42□□□□□ -1.22
CD44-211ENST00000442151 GCGRP47871 477 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 KCNJ1P48048 391 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 FAM53BQ14153 422 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 SIX1Q15475 284 aaPredicted RBP7.42□□□□□ -1.22
CD44-211ENST00000442151 INAQ16352 499 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 KLHL38Q2WGJ6 581 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 FBXO42Q6P3S6 717 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 IGFL2Q6UWQ7 119 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 RIPOR1Q6ZS17 1223 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 TAX1BP1Q86VP1 789 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 GAS2L3Q86XJ1 694 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 CISD2Q8N5K1 135 aaKnown RBP7.42□□□□□ -1.22
CD44-211ENST00000442151 STT3BQ8TCJ2 826 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 SNRNP40Q96DI7 357 aaKnown RBP7.42□□□□□ -1.22
CD44-211ENST00000442151 MFSD3Q96ES6 412 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 CCDC138Q96M89 665 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 BIRC8Q96P09 236 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 IL17FQ96PD4 163 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 DPH7Q9BTV6 452 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 SLC6A20Q9NP91 592 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 RIC8BQ9NVN3 520 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 ABI3Q9P2A4 366 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 C3orf18Q9UK00 162 aa7.42□□□□□ -1.22
CD44-211ENST00000442151 MRPS2Q9Y399 296 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms