RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 TFAP2CQ92754 450 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 SMIM14Q96QK8 99 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 MRPL57Q9BQC6 102 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 CENPKQ9BS16 269 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 TRNAU1APQ9NX07 287 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 NDUFA13Q9P0J0 144 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 ME2P23368 584 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 NDUFS1P28331 727 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 ACADVLP49748 655 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 CDKN2DP55273 166 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 GABREP78334 506 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 CTBP1Q13363 440 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 FGL2Q14314 439 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 ST3GAL2Q16842 350 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 C5orf22Q49AR2 442 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 LYPLAL1Q5VWZ2 237 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 REP15Q6BDI9 236 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZNF470Q6ECI4 717 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 USP51Q70EK9 711 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 ISCA2Q86U28 154 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 ST13P4Q8IZP2 240 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 TRAM1L1Q8N609 369 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 ARL10Q8N8L6 244 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 HCAR2Q8TDS4 363 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 IMP4Q96G21 291 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 COPS7BQ9H9Q2 264 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 UCKL1Q9NWZ5 548 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 HCN2Q9UL51 889 aa7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 ATXN7L1Q9ULK2 861 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 RUVBL2Q9Y230 463 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-208ENST00000442054 UNC13CQ8NB66 2214 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 FAM95CA0A1B0GW59 222 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 LMO7DNF2Z398 122 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 PRMT5O14744 637 aaPredicted RBP7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 AIM2O14862 343 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 AREL1O15033 823 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 KPNA5O15131 536 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 TNFSF15O95150 251 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 CPNE6O95741 557 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 EPOP01588 193 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 FGF4P08620 206 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZNF23P17027 643 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 POLE2P56282 527 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 CACNG1Q06432 222 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 DYNC1I2Q13409 638 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 PTPRCAPQ14761 206 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 C6orf163Q5TEZ5 329 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 MLIPQ5VWP3 458 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 PPP4R4Q6NUP7 873 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 NEPROQ6NW34 567 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 RPS27LQ71UM5 84 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 MYO1HQ8N1T3 1032 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 PGBD5Q8N414 524 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 SPATA6LQ8N4H0 392 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 PLA2G15Q8NCC3 412 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 CCDC74AQ96AQ1 378 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 PTERQ96BW5 349 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 PCDHAC1Q9H158 963 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 MRPL46Q9H2W6 279 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 VCX3BQ9H321 246 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 SLC39A1Q9NY26 324 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 CIDEBQ9UHD4 219 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 IKZF3Q9UKT9 509 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 HEBP2Q9Y5Z4 205 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 ANAPC1Q9H1A4 1944 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 A0A087X1B8 175 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 LOC285095A0A1B0GVY8 99 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 C9J4A7 227 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 VEGFDO43915 354 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 CSF2P04141 144 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 PROS1P07225 676 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 NME1P15531 152 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 SLC7A1P30825 629 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 NSG1P42857 185 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 POU4F1Q01851 419 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 PTPRRQ15256 657 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 ALG11Q2TAA5 492 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 GPR33Q49SQ1 333 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 UNC50Q53HI1 259 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 MANEAQ5SRI9 462 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZNF678Q5SXM1 525 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 ALG1LQ6GMV1 187 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 CERS6Q6ZMG9 384 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 KIAA0408Q6ZU52 694 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 PIWIL4Q7Z3Z4 852 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 SNX20Q7Z614 316 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 ARRDC2Q8TBH0 407 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 SREK1Q8WXA9 508 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 TMIGD2Q96BF3 282 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 GBP5Q96PP8 586 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 TRIM4Q9C037 500 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 KLHL25Q9H0H3 589 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 TRIT1Q9H3H1 467 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 COQ10BQ9H8M1 238 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 AGPAT4Q9NRZ5 378 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 ATXN10Q9UBB4 475 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 GNPTGQ9UJJ9 305 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZNF225Q9UK10 706 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZFR2Q9UPR6 939 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 PCDHA9Q9Y5H5 950 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms