RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 WDR45BQ5MNZ6 344 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 UNC5DQ6UXZ4 953 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 PRR23BQ6ZRT6 265 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 LPCAT2Q7L5N7 544 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 RETREG3Q86VR2 466 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 IQCHQ86VS3 1027 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 LRRC58Q96CX6 371 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 CCDC138Q96M89 665 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 EFHD1Q9BUP0 239 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 TMEM168Q9H0V1 697 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 GPR27Q9NS67 375 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 TRNAU1APQ9NX07 287 aaKnown RBP20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 ABCD2Q9UBJ2 740 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 C15orf38-AP3S2A0A0A6YYH1 394 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 PRORSD1PA6NEY8 169 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 LSM1O15116 133 aaKnown RBP20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 MSX2P35548 267 aaPredicted RBP20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 MRPS35P82673 323 aaKnown RBP20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 CTBSQ01459 385 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 BNIP2Q12982 314 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 FZD2Q14332 565 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 FAM219BQ5XKK7 198 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 ARPINQ7Z6K5 226 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 MAML2Q8IZL2 1156 aaPredicted RBP20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 SFRP1Q8N474 314 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 FBXO15Q8NCQ5 510 aaPredicted RBP20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 DNASE2BQ8WZ79 361 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 C1orf50Q9BV19 199 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 TM9SF3Q9HD45 589 aa20.74■□□□□ 0.91
CDKN1C-204ENST00000440480 RPN2P04844 631 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 C8BP07358 591 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 GDF5P43026 501 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 UFM1P61960 85 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 RHDQ02161 417 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 NFYCQ13952 458 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 ABRAXAS2Q15018 415 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 IMPG1Q17R60 797 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 CAPRIN2Q6IMN6 1127 aaKnown RBP20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 RNF111Q6ZNA4 994 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 ARMCX6Q7L4S7 300 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 DHFR2Q86XF0 187 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 DTWD2Q8NBA8 298 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 ZBTB18Q99592 522 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 MUC13Q9H3R2 512 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 ACTR8Q9H981 624 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 WDR37Q9Y2I8 494 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 ANKRD12Q6UB98 2062 aa20.73■□□□□ 0.91
CDKN1C-204ENST00000440480 PRR19A6NJB7 356 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 PDZK1P1A8MUH7 402 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 TLR4O00206 839 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 HSD17B1P14061 328 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 BDKRB1P46663 353 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 HTR6P50406 440 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 BLKP51451 505 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 TCEA2Q15560 299 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 CCSMST1Q4G0I0 132 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 TRIM46Q7Z4K8 759 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 PARGQ86W56 976 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 PDSS2Q86YH6 399 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 FAM156AQ8NDB6 213 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 PHC3Q8NDX5 983 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 ATL1Q8WXF7 558 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 ZUFSPQ96AP4 578 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 NR1H4Q96RI1 486 aaPredicted RBP20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 SLC52A3Q9NQ40 469 aa20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 CFAP20Q9Y6A4 193 aaKnown RBP20.72■□□□□ 0.91
CDKN1C-204ENST00000440480 A0A1W2PR77 199 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 WNT1P04628 370 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 AK4P27144 223 aaPredicted RBP20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 ILF3Q12906 894 aaKnown RBP eCLIP20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 EIF2B5Q13144 721 aaKnown RBP20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 BLMHQ13867 455 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 UAP1L1Q3KQV9 507 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 GGTA1PQ4G0N0 100 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 ZNF542PQ5EBM4 170 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 OGFRL1Q5TC84 451 aaPredicted RBP20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 IRAK1BP1Q5VVH5 260 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 C11orf74Q86VG3 221 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 ZFAND4Q86XD8 727 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 KBTBD2Q8IY47 623 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 FAM9CQ8IZT9 166 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 ICA1LQ8NDH6 482 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 C1orf216Q8TAB5 229 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 DUS3LQ96G46 650 aaKnown RBP20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 PKP4Q99569 1192 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 IL1RL2Q9HB29 575 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 PRDM8Q9NQV8 689 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 CIDEBQ9UHD4 219 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 ZNF490Q9ULM2 529 aaPredicted RBP20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 SNX6Q9UNH7 406 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 CACNA1IQ9P0X4 2223 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 KRT87PA6NCN2 255 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 SLC2A4P14672 509 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 ACTR1BP42025 376 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 ACTR1AP61163 376 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 GRAMD1BQ3KR37 738 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 CACHD1Q5VU97 1274 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 IL23RQ5VWK5 629 aa20.71■□□□□ 0.91
CDKN1C-204ENST00000440480 LPCAT4Q643R3 524 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms