RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ELF3P78545 371 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 CDK16Q00536 496 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 GBE1Q04446 702 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC18A2Q05940 514 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 DEUP1Q05D60 604 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 ADIGQ0VDE8 80 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 BNIP1Q12981 228 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 MTAPQ13126 283 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 DNAJC3Q13217 504 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 MTA1Q13330 715 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 PAFAH1B3Q15102 231 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 PDK1Q15118 436 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SEC23BQ15437 767 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 GPR68Q15743 365 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZKSCAN8Q15776 578 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 PARP6Q2NL67 630 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 KBTBD12Q3ZCT8 623 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 KLHL22Q53GT1 634 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 MDH1BQ5I0G3 518 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SYPL2Q5VXT5 272 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 MFSD14CQ5VZR4 134 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 NCBP2-AS2Q69YL0 99 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 CGB2Q6NT52 195 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 LRRC8BQ6P9F7 803 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 RBM44Q6ZP01 1051 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 CLEC20AQ6ZU45 233 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM47EQ6ZV65 393 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SH2D5Q6ZV89 423 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 PAQR9Q6ZVX9 377 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 CYS1Q717R9 158 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 OTOAQ7RTW8 1153 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 BNIPLQ7Z465 357 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 R3HCC1LQ7Z5L2 792 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 PRPF39Q86UA1 669 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 LRRC6Q86X45 466 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 METTL23Q86XA0 190 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM131BQ86XD5 332 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 ARMC8Q8IUR7 673 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 CTAGE3PQ8IX95 158 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 PYROXD2Q8N2H3 581 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 COLGALT1Q8NBJ5 622 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 LSM14AQ8ND56 463 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 OR52L2PQ8NGH6 319 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 GSDMBQ8TAX9 411 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 RNF139Q8WU17 664 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 NDRG1Q92597 394 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 AKAP1Q92667 903 aaKnown RBP eCLIP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 NT5C3BQ969T7 300 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 NTAN1Q96AB6 310 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM149B1Q96BN6 582 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 STAMBPL1Q96FJ0 436 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 APOPT1Q96IL0 206 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SERAC1Q96JX3 654 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SPATA13Q96N96 652 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 OLFM3Q96PB7 478 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 NPY6RQ99463 290 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 KLF6Q99612 283 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 EBNA1BP2Q99848 306 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SYT15Q9BQS2 421 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 FUZQ9BT04 418 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 ULBP1Q9BZM6 244 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 ARHGAP39Q9C0H5 1083 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 TASP1Q9H6P5 420 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 ECT2Q9H8V3 914 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 PLEKHA2Q9HB19 425 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 POPDC2Q9HBU9 364 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SEMA4BQ9NPR2 832 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 EIF2B3Q9NR50 452 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 PLSCR4Q9NRQ2 329 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 TXLNGQ9NUQ3 528 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 ABCF3Q9NUQ8 709 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 MIOSQ9NXC5 875 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZDHHC7Q9NXF8 308 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 DDX43Q9NXZ2 648 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 COX16Q9P0S2 106 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZNF580Q9UK33 172 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 CDH9Q9ULB4 789 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 GRID1Q9ULK0 1009 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC8A2Q9UPR5 921 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 RCE1Q9Y256 329 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 MAD1L1Q9Y6D9 718 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 USH1CQ9Y6N9 552 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SCN4AP35499 1836 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SF3B1O75533 1304 aaKnown RBP eCLIP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZSWIM8A7E2V4 1837 aa3.4□□□□□ -1.86
HMGB3P11-201ENST00000440127 PLXNB2O15031 1838 aa3.4□□□□□ -1.86
HMGB3P11-201ENST00000440127 A0A1W2PRQ8 180 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 MYBPHLA2RUH7 354 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 DPPA5A6NC42 116 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARL5CA6NH57 179 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM159BA6NKW6 160 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 YJEFN3A6XGL0 299 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 E7ENQ6 273 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 GOLGA8RI6L899 631 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 CHUKO15111 745 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 PSMD3O43242 534 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 CA12O43570 354 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 MGRN1O60291 552 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 HNRNPCL1O60812 293 aaKnown RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 PIAS1O75925 651 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms