RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 AGO1Q9UL18 857 aaKnown RBP8.33□□□□□ -1.08
HPS4-206ENST00000439453 SNX6Q9UNH7 406 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 FAM50BQ9Y247 325 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 MAU2Q9Y6X3 613 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 H3BQ06 376 aaPredicted RBP8.33□□□□□ -1.08
HPS4-206ENST00000439453 M0R082 166 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 SNX4O95219 450 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 MMP2P08253 660 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 HTR6P50406 440 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 ERVPABLB-1P60509 514 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 ELAVL2Q12926 359 aaKnown RBP8.33□□□□□ -1.08
HPS4-206ENST00000439453 NR6A1Q15406 480 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 SNAP47Q5SQN1 464 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 AFMIDQ63HM1 303 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 SIGIRRQ6IA17 410 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 IL27RAQ6UWB1 636 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.33□□□□□ -1.08
HPS4-206ENST00000439453 RFPL4BQ6ZWI9 263 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 CEP68Q76N32 757 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 MSRB3Q8IXL7 192 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 BEND7Q8N7W2 519 aaPredicted RBP8.33□□□□□ -1.08
HPS4-206ENST00000439453 NETO1Q8TDF5 533 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 HLA-CQ95604 372 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 ZNF707Q96C28 371 aaPredicted RBP8.33□□□□□ -1.08
HPS4-206ENST00000439453 PCED1BQ96HM7 432 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 MED30Q96HR3 178 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 ST6GAL2Q96JF0 529 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 DMRTB1Q96MA1 342 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 HBEGFQ99075 208 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 RASSF1Q9NS23 344 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 CCDC59Q9P031 241 aaKnown RBP8.33□□□□□ -1.08
HPS4-206ENST00000439453 RAPGEFL1Q9UHV5 662 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 EIF2B4Q9UI10 523 aaKnown RBP8.33□□□□□ -1.08
HPS4-206ENST00000439453 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.33□□□□□ -1.08
HPS4-206ENST00000439453 ASB1Q9Y576 335 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 ANKRD36A6QL64 1941 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 UBA6A0AVT1 1052 aaPredicted RBP8.33□□□□□ -1.08
HPS4-206ENST00000439453 MYBPHLA2RUH7 354 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 CCRL2O00421 344 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 BTN3A1O00481 513 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 KLK8O60259 260 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 RECQL5O94762 991 aaPredicted RBP8.33□□□□□ -1.08
HPS4-206ENST00000439453 TYMPP19971 482 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 RAB33AQ14088 237 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 SETMARQ53H47 684 aaPredicted RBP8.33□□□□□ -1.08
HPS4-206ENST00000439453 MANEALQ5VSG8 457 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 NXNL2Q5VZ03 156 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 KDM4DQ6B0I6 523 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 GCNT7Q6ZNI0 430 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 FCGR1BQ92637 280 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 UBE2FQ969M7 185 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 PYURFQ96I23 114 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 CATSPERZQ9NTU4 200 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 SLC25A37Q9NYZ2 338 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 MPP6Q9NZW5 540 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 MKLN1Q9UL63 735 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 NDRG4Q9ULP0 352 aaKnown RBP8.33□□□□□ -1.08
HPS4-206ENST00000439453 PEX16Q9Y5Y5 336 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 WDFY4Q6ZS81 3184 aa8.33□□□□□ -1.08
HPS4-206ENST00000439453 COL4A3Q01955 1670 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 GOLGA8CPA6NN73 597 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 A8MV72 311 aaPredicted RBP8.32□□□□□ -1.08
HPS4-206ENST00000439453 AP3D1O14617 1153 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 PEX11BO96011 259 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 AKT1P31749 480 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 DDOSTP39656 456 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 GALK2Q01415 458 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 ACVR1Q04771 509 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 GTF2H3Q13889 308 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 MAPKAPK3Q16644 382 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 AP5B1Q2VPB7 878 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 LETMD1Q6P1Q0 360 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 LRRTM3Q86VH5 581 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 TSPYL5Q86VY4 417 aaPredicted RBP8.32□□□□□ -1.08
HPS4-206ENST00000439453 ZDHHC21Q8IVQ6 265 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 PHACTR4Q8IZ21 702 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 KBTBD8Q8NFY9 601 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 OR52B6Q8NGF0 335 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 ELMO1Q92556 727 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 FCRL2Q96LA5 508 aaPredicted RBP8.32□□□□□ -1.08
HPS4-206ENST00000439453 ZNF382Q96SR6 550 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 ZBTB18Q99592 522 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 SH3GL1Q99961 368 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 TMLHEQ9NVH6 421 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 TAS2R13Q9NYV9 303 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 ARL5AQ9Y689 179 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 DMDP11532 3685 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 MBTPS2O43462 519 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 SEC22BO75396 215 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 WBP4O75554 376 aaKnown RBP8.32□□□□□ -1.08
HPS4-206ENST00000439453 DNTTP04053 509 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 ATXN1LP0C7T5 689 aaKnown RBP8.32□□□□□ -1.08
HPS4-206ENST00000439453 PRSS56P0CW18 603 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 IL1RNP18510 177 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 EPHA2P29317 976 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 FMO4P31512 558 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 RENBPP51606 427 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 STC1P52823 247 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 TIGD6Q17RP2 521 aa8.32□□□□□ -1.08
HPS4-206ENST00000439453 RUNDC3AQ59EK9 446 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms