RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 A0A1B0GVC2 190 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 A6NIN4 97 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 SYN3O14994 580 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 FFAR2O15552 330 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 TLL1O43897 1013 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 ACRP10323 421 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 HSD17B1P14061 328 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 CASP3P42574 277 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 ZNF404Q494X3 552 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 LAIR1Q6GTX8 287 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 MINDY1Q8N5J2 469 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 GPR156Q8NFN8 814 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 MYO19Q96H55 970 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 APOLD1Q96LR9 279 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 RNF208Q9H0X6 261 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 LINC00597Q9H2U6 94 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 USE1Q9NZ43 259 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 MAT2BQ9NZL9 334 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 DNMT3BQ9UBC3 853 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 CLEC4AQ9UMR7 237 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 WBP11Q9Y2W2 641 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 TPRKBQ9Y3C4 175 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 N6AMT1Q9Y5N5 214 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 GPR45Q9Y5Y3 372 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 PRSS21Q9Y6M0 314 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 A0A1W2PRU2 124 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 LCHNA4D1U4 455 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 SOBPA7XYQ1 873 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 LOC730098B7Z3J9 87 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 WWP2O00308 870 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 TPST2O60704 377 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 MED26O95402 600 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 CAPNS1P04632 268 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 HIST1H2AGP0C0S8 130 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 DDX5P17844 614 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 HIST1H2ADP20671 130 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 PPP3CCP48454 512 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 MAPKAPK2P49137 400 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 HIST2H2ACQ16777 129 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 GOLGA7Q7Z5G4 137 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 MEX3DQ86XN8 651 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 LYSMD2Q8IV50 215 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 ADHFE1Q8IWW8 467 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 PACRGLQ8N7B6 248 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 OR6Q1Q8NGQ2 317 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 LKAAEAR1Q8TD35 194 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 SORCS1Q8WY21 1168 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 NELL1Q92832 810 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 PHF21AQ96BD5 680 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 MTERF3Q96E29 417 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 CCDC120Q96HB5 630 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 HIST1H2AHQ96KK5 128 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 HIST1H2AJQ99878 128 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 H2AFJQ9BTM1 129 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 ARNT2Q9HBZ2 717 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 RANGRFQ9HD47 186 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 THG1LQ9NWX6 298 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 CLEC4EQ9ULY5 219 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 OR6C70A6NIJ9 312 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 FAM155AB1AL88 458 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 CACNG3O60359 315 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 PAPSS2O95340 614 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 UROSP10746 265 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 TGM1P22735 817 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 DSC1Q08554 894 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 PON2Q15165 354 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 CARD16Q5EG05 197 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 GTF2IRD2BQ6EKJ0 949 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 GTF2IRD2Q86UP8 949 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 SLC13A3Q8WWT9 602 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 S100ZQ8WXG8 99 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 FOXJ1Q92949 421 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 SCAMP4Q969E2 229 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 RBM4BQ9BQ04 359 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 RBM4Q9BWF3 364 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 FAM126AQ9BYI3 521 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 TRIM54Q9BYV2 358 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 MRM3Q9HC36 420 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 NLE1Q9NVX2 485 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 MARCH5Q9NX47 278 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 TMEM9Q9P0T7 183 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 RAPGEFL1Q9UHV5 662 aa9.66□□□□□ -0.86
CDC42SE1-202ENST00000439374 GSAPA4D1B5 854 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 BBIP1A8MTZ0 92 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 SLC22A2O15244 555 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 ZW10O43264 779 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 LRRTM2O43300 516 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 PSIP1O75475 530 aaKnown RBP9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 PRLP01236 227 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 KRT20P35900 424 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 HTR2BP41595 481 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 RECQLP46063 649 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 DEFA1P59665 94 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 DEFA3P59666 94 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 ARF5P84085 180 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 SLAMF1Q13291 335 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 CEP78Q5JTW2 689 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 DCP2Q8IU60 420 aaKnown RBP9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 MMAAQ8IVH4 418 aaKnown RBP9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 LEMD2Q8NC56 503 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms