RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 GRK4P32298 578 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 SUOXP51687 545 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 MLLT6P55198 1093 aaPredicted RBP13□□□□□ -0.33
ACTN1-204ENST00000438964 GPR50Q13585 617 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 NFE2L1Q14494 772 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 RFX4Q33E94 735 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 FBXL22Q6P050 247 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 MSANTD2Q6P1R3 559 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 CCDC117Q8IWD4 279 aaPredicted RBP13□□□□□ -0.33
ACTN1-204ENST00000438964 CLECL1Q8IZS7 167 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 ZNF557Q8N988 423 aaPredicted RBP13□□□□□ -0.33
ACTN1-204ENST00000438964 SPPL2AQ8TCT8 520 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 ULK4Q96C45 1275 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 TRMT61AQ96FX7 289 aaKnown RBP13□□□□□ -0.33
ACTN1-204ENST00000438964 FAM8A1Q9UBU6 413 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 TEKT2Q9UIF3 430 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 A0A0B4J293 547 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 LOC105371267A0A1B0GV96 52 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 ULK1O75385 1050 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 S100A3P33764 101 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 FEN1P39748 380 aaKnown RBP13□□□□□ -0.33
ACTN1-204ENST00000438964 GRIK2Q13002 908 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 MFSD10Q14728 455 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 MS4A13Q5J8X5 152 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 BCDIN3DQ7Z5W3 292 aaKnown RBP13□□□□□ -0.33
ACTN1-204ENST00000438964 TSPYL5Q86VY4 417 aaPredicted RBP13□□□□□ -0.33
ACTN1-204ENST00000438964 OR9Q2Q8NGE9 314 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 BRSK1Q8TDC3 778 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 RNF31Q96EP0 1072 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 ABHD16BQ9H3Z7 469 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 LRTM1Q9HBL6 345 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 MS4A12Q9NXJ0 267 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 RHCGQ9UBD6 479 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 DNMT3LQ9UJW3 386 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 PPT2Q9UMR5 302 aa13□□□□□ -0.33
ACTN1-204ENST00000438964 DNAJC25-GNG10A0A024R161 153 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 LOC285095A0A1B0GVY8 99 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 CENPBD1B2RD01 187 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 NFKBIEO00221 500 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 RFXANKO14593 260 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 RAMP2O60895 175 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 PRAMEF12O95522 483 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 CCNYL3P0C7X3 344 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 PRKACBP22694 351 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 DNAJA1P31689 397 aaKnown RBP12.99□□□□□ -0.33
ACTN1-204ENST00000438964 RPS19P39019 145 aaKnown RBP12.99□□□□□ -0.33
ACTN1-204ENST00000438964 CHRNEQ04844 493 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 STARD3Q14849 445 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 PROX2Q3B8N5 592 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 USP39Q53GS9 565 aaKnown RBP12.99□□□□□ -0.33
ACTN1-204ENST00000438964 LIMS2Q7Z4I7 341 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 LKAAEAR1Q8TD35 194 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 PIK3R3Q92569 461 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 OMA1Q96E52 524 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 IL4I1Q96RQ9 567 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 NIPSNAP1Q9BPW8 284 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 CPPED1Q9BRF8 314 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-204ENST00000438964 RAPGEFL1Q9UHV5 662 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 MYO10Q9HD67 2058 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 MKI67P46013 3256 aaKnown RBP12.99□□□□□ -0.33
ACTN1-204ENST00000438964 FFAR2O15552 330 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 SNX4O95219 450 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 NPPAP01160 153 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 MMP3P08254 477 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 KCNE1P15382 129 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 CTPS1P17812 591 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 TUBA1BP68363 451 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 PRKCDQ05655 676 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 FADDQ13158 208 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 IL18R1Q13478 541 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 ARHGEF7Q14155 803 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 CCDC85BQ15834 202 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-204ENST00000438964 OVOS1Q6IE37 1185 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 TUBA1AQ71U36 451 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 NOXA1Q86UR1 476 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 TTC9BQ8N6N2 239 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 OR6K2Q8NGY2 324 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 BHMTQ93088 406 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 APOLD1Q96LR9 279 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 SNX18Q96RF0 628 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 BARHL1Q9BZE3 327 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 POLR1EQ9GZS1 481 aaKnown RBP12.99□□□□□ -0.33
ACTN1-204ENST00000438964 IL1RAPQ9NPH3 570 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 SERHLQ9NQF3 203 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 WWOXQ9NZC7 414 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 CLCA3PQ9Y6N3 262 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 EFCAB10A6NFE3 127 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 A8MUA0 341 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 J3KTA2 159 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 STX16O14662 325 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 GPX5O75715 221 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 RETP07949 1114 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 GNPDA1P46926 289 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 NRIP1P48552 1158 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 CAV3P56539 151 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 BEX3Q00994 111 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 ELP6Q0PNE2 266 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 DDX39BQ13838 428 aaKnown RBP12.99□□□□□ -0.33
ACTN1-204ENST00000438964 KEAP1Q14145 624 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 LINGO4Q6UY18 593 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms