RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 BOP1Q14137 746 aaKnown RBP10.61□□□□□ -0.71
CSTF3-203ENST00000438862 NAPRTQ6XQN6 538 aa10.61□□□□□ -0.71
CSTF3-203ENST00000438862 C3P1Q6ZMU1 363 aa10.61□□□□□ -0.71
CSTF3-203ENST00000438862 TTC29Q8NA56 475 aaPredicted RBP10.61□□□□□ -0.71
CSTF3-203ENST00000438862 FLVCR1-AS1Q8TAF5 88 aa10.61□□□□□ -0.71
CSTF3-203ENST00000438862 LRRN4Q8WUT4 740 aa10.61□□□□□ -0.71
CSTF3-203ENST00000438862 TFGQ92734 400 aaPredicted RBP10.61□□□□□ -0.71
CSTF3-203ENST00000438862 RMND5BQ96G75 393 aaPredicted RBP10.61□□□□□ -0.71
CSTF3-203ENST00000438862 MESP1Q9BRJ9 268 aa10.61□□□□□ -0.71
CSTF3-203ENST00000438862 LIME1Q9H400 295 aa10.61□□□□□ -0.71
CSTF3-203ENST00000438862 ZNF304Q9HCX3 659 aa10.61□□□□□ -0.71
CSTF3-203ENST00000438862 ENAMQ9NRM1 1142 aa10.61□□□□□ -0.71
CSTF3-203ENST00000438862 ZNF358Q9NW07 568 aa10.61□□□□□ -0.71
CSTF3-203ENST00000438862 OR6C2Q9NZP2 312 aa10.61□□□□□ -0.71
CSTF3-203ENST00000438862 ZNF282Q9UDV7 671 aaPredicted RBP10.61□□□□□ -0.71
CSTF3-203ENST00000438862 ICKQ9UPZ9 632 aa10.61□□□□□ -0.71
CSTF3-203ENST00000438862 PKP3Q9Y446 797 aa10.61□□□□□ -0.71
CSTF3-203ENST00000438862 AKAP6Q13023 2319 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 IGHV1-45A0A0A0MS14 117 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 NKX2-6A6NCS4 301 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 IDSB3KWA1 339 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 GAPDHSO14556 408 aaPredicted RBP10.6□□□□□ -0.71
CSTF3-203ENST00000438862 SGTAO43765 313 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 FTCDO95954 541 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 CD48P09326 243 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 KDELR1P24390 212 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 EEF1DP29692 281 aaKnown RBP10.6□□□□□ -0.71
CSTF3-203ENST00000438862 PTPN7P35236 360 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 SSR1P43307 286 aaKnown RBP10.6□□□□□ -0.71
CSTF3-203ENST00000438862 PRLHRP49683 370 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 YBX1P67809 324 aaKnown RBP10.6□□□□□ -0.71
CSTF3-203ENST00000438862 ZNF33BQ06732 778 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 PPIDQ08752 370 aaKnown RBP10.6□□□□□ -0.71
CSTF3-203ENST00000438862 ZBTB17Q13105 803 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 RPA4Q13156 261 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 DPYSL3Q14195 570 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 KIR2DS3Q14952 304 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 TAZQ16635 292 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 ODF2Q5BJF6 829 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 ZC3H12BQ5HYM0 836 aaKnown RBP10.6□□□□□ -0.71
CSTF3-203ENST00000438862 CEP128Q6ZU80 1094 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 KCTD6Q8NC69 237 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 FAM98AQ8NCA5 519 aaKnown RBP10.6□□□□□ -0.71
CSTF3-203ENST00000438862 MYRIPQ8NFW9 859 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 HDAC10Q969S8 669 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 DCUN1D1Q96GG9 259 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 PBKQ96KB5 322 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 NAPGQ99747 312 aaPredicted RBP10.6□□□□□ -0.71
CSTF3-203ENST00000438862 ZNF670Q9BS34 389 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 TRIM51Q9BSJ1 452 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 HGH1Q9BTY7 390 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 TSPAN10Q9H1Z9 355 aaPredicted RBP10.6□□□□□ -0.71
CSTF3-203ENST00000438862 GOLPH3Q9H4A6 298 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 COG4Q9H9E3 785 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 SPHK1Q9NYA1 384 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 RNF14Q9UBS8 474 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 POLG2Q9UHN1 485 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 FKBPLQ9UIM3 349 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 TTC7AQ9ULT0 858 aaPredicted RBP10.6□□□□□ -0.71
CSTF3-203ENST00000438862 ASB1Q9Y576 335 aa10.6□□□□□ -0.71
CSTF3-203ENST00000438862 FN1P02751 2386 aaKnown RBP10.6□□□□□ -0.71
CSTF3-203ENST00000438862 FAM237BA0A1B0GVD1 139 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 LOC285095A0A1B0GVY8 99 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 FITM1A5D6W6 292 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 ISM1B1AKI9 464 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 KDM1AO60341 852 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 EPOP01588 193 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 ITGAMP11215 1152 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 CASQ1P31415 396 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 TNNT3P45378 269 aaPredicted RBP10.59□□□□□ -0.71
CSTF3-203ENST00000438862 EMP2P54851 167 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 GBE1Q04446 702 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 SLC10A2Q12908 348 aaPredicted RBP10.59□□□□□ -0.71
CSTF3-203ENST00000438862 PRMT9Q6P2P2 845 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 KDELC1Q6UW63 502 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 GLT6D1Q7Z4J2 308 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 SIAH3Q8IW03 269 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 CHERPQ8IWX8 916 aaKnown RBP10.59□□□□□ -0.71
CSTF3-203ENST00000438862 C17orf53Q8N3J3 647 aaPredicted RBP10.59□□□□□ -0.71
CSTF3-203ENST00000438862 TMEM178AQ8NBL3 297 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 SPATA22Q8NHS9 363 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 HEXDCQ8WVB3 486 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 RND1Q92730 232 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 KRT35Q92764 455 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 FAF2Q96CS3 445 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 FRMD6Q96NE9 622 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 UCK2Q9BZX2 261 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 ASB8Q9H765 288 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 VPS37BQ9H9H4 285 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 SNX12Q9UMY4 172 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 RNF6Q9Y252 685 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 PLEKHA6Q9Y2H5 1048 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 HYOU1Q9Y4L1 999 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 MAU2Q9Y6X3 613 aa10.59□□□□□ -0.71
CSTF3-203ENST00000438862 SNRNP200O75643 2136 aaKnown RBP10.58□□□□□ -0.72
CSTF3-203ENST00000438862 FBN1P35555 2871 aaKnown RBP10.58□□□□□ -0.72
CSTF3-203ENST00000438862 IGLV3-12A0A075B6K2 115 aa10.58□□□□□ -0.72
CSTF3-203ENST00000438862 FAM90A27PA6NNH2 459 aa10.58□□□□□ -0.72
CSTF3-203ENST00000438862 STX7O15400 261 aaKnown RBP10.58□□□□□ -0.72
CSTF3-203ENST00000438862 KLK8O60259 260 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms