RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 MTAPQ13126 283 aa24.85■■□□□ 1.57
CPNE1-216ENST00000437340 MAP7Q14244 749 aa24.85■■□□□ 1.57
CPNE1-216ENST00000437340 PLA2G4EQ3MJ16 856 aa24.85■■□□□ 1.57
CPNE1-216ENST00000437340 ACSM2BQ68CK6 577 aa24.85■■□□□ 1.57
CPNE1-216ENST00000437340 GLYATQ6IB77 296 aa24.85■■□□□ 1.57
CPNE1-216ENST00000437340 MED27Q6P2C8 311 aa24.85■■□□□ 1.57
CPNE1-216ENST00000437340 FAM83HQ6ZRV2 1179 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-216ENST00000437340 MSRB3Q8IXL7 192 aa24.85■■□□□ 1.57
CPNE1-216ENST00000437340 SETD7Q8WTS6 366 aaKnown RBP24.85■■□□□ 1.57
CPNE1-216ENST00000437340 NSMCE2Q96MF7 247 aa24.85■■□□□ 1.57
CPNE1-216ENST00000437340 MTERF1Q99551 399 aaKnown RBP24.85■■□□□ 1.57
CPNE1-216ENST00000437340 CDX2Q99626 313 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-216ENST00000437340 RPF2Q9H7B2 306 aaKnown RBP24.85■■□□□ 1.57
CPNE1-216ENST00000437340 SERHLQ9NQF3 203 aa24.85■■□□□ 1.57
CPNE1-216ENST00000437340 AGPAT4Q9NRZ5 378 aa24.85■■□□□ 1.57
CPNE1-216ENST00000437340 SLC25A37Q9NYZ2 338 aa24.85■■□□□ 1.57
CPNE1-216ENST00000437340 ANAPC2Q9UJX6 822 aa24.85■■□□□ 1.57
CPNE1-216ENST00000437340 MYO1DO94832 1006 aa24.84■■□□□ 1.57
CPNE1-216ENST00000437340 NCK1P16333 377 aa24.84■■□□□ 1.57
CPNE1-216ENST00000437340 PLIN5Q00G26 463 aa24.84■■□□□ 1.57
CPNE1-216ENST00000437340 SRSF11Q05519 484 aaKnown RBP24.84■■□□□ 1.57
CPNE1-216ENST00000437340 ATG9BQ674R7 924 aa24.84■■□□□ 1.57
CPNE1-216ENST00000437340 AMIGO2Q86SJ2 522 aa24.84■■□□□ 1.57
CPNE1-216ENST00000437340 APLFQ8IW19 511 aaPredicted RBP24.84■■□□□ 1.57
CPNE1-216ENST00000437340 STARD8Q92502 1023 aa24.84■■□□□ 1.57
CPNE1-216ENST00000437340 RAD51AP1Q96B01 352 aa24.84■■□□□ 1.57
CPNE1-216ENST00000437340 THUMPD3Q9BV44 507 aaKnown RBP24.84■■□□□ 1.57
CPNE1-216ENST00000437340 PAIP1Q9H074 479 aaKnown RBP24.84■■□□□ 1.57
CPNE1-216ENST00000437340 COQ10BQ9H8M1 238 aa24.84■■□□□ 1.57
CPNE1-216ENST00000437340 FBRSQ9HAH7 460 aa24.84■■□□□ 1.57
CPNE1-216ENST00000437340 PPT2Q9UMR5 302 aa24.84■■□□□ 1.57
CPNE1-216ENST00000437340 MAPRE3Q9UPY8 281 aa24.84■■□□□ 1.57
CPNE1-216ENST00000437340 PRUNE2Q8WUY3 3088 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 A0A1W2PP55 124 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 EIF4E1BA6NMX2 242 aaKnown RBP24.83■■□□□ 1.57
CPNE1-216ENST00000437340 TXNDC9O14530 226 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 MBTPS2O43462 519 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 GGT1P19440 569 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 OXTRP30559 389 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 TRIM23P36406 574 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 STARD3Q14849 445 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 PAGE2BQ5JRK9 111 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 DOK6Q6PKX4 331 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 TMPRSS11BQ86T26 416 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 GPR180Q86V85 440 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 SYT12Q8IV01 421 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 TBC1D21Q8IYX1 336 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 RNF175Q8N4F7 328 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 OR2T12Q8NG77 320 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 FAM131CQ96AQ9 280 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 ZNF597Q96LX8 424 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 CCDC177Q9NQR7 707 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-216ENST00000437340 DLGAP2Q9P1A6 1054 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 SERGEFQ9UGK8 458 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 ASF1AQ9Y294 204 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 PCYT1BQ9Y5K3 369 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-216ENST00000437340 AP4B1Q9Y6B7 739 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 COL4A2P08572 1712 aa24.83■■□□□ 1.57
CPNE1-216ENST00000437340 C2CD4DB7Z1M9 353 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 PI15O43692 258 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 GMNNO75496 209 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 UBTFL6P0CB48 400 aaPredicted RBP24.82■■□□□ 1.56
CPNE1-216ENST00000437340 C1GALT1C1LP0DN25 315 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 KELP23276 732 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 TIE1P35590 1138 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 SMAD4Q13485 552 aaKnown RBP24.82■■□□□ 1.56
CPNE1-216ENST00000437340 DDX39BQ13838 428 aaKnown RBP24.82■■□□□ 1.56
CPNE1-216ENST00000437340 PDK3Q15120 406 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 SKIV2LQ15477 1246 aaKnown RBP24.82■■□□□ 1.56
CPNE1-216ENST00000437340 SPIN4Q56A73 249 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 CACUL1Q86Y37 369 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 DCUN1D3Q8IWE4 304 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 TMEM132CQ8N3T6 1108 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 DTWD1Q8N5C7 304 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 HUS1BQ8NHY5 278 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 BIRC7Q96CA5 298 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 GABRG3Q99928 467 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 LGR4Q9BXB1 951 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 GORASP2Q9H8Y8 452 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 USP22Q9UPT9 525 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 MAGEB17A8MXT2 336 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 FOXE1O00358 373 aaPredicted RBP24.82■■□□□ 1.56
CPNE1-216ENST00000437340 KMOO15229 486 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 RPN2P04844 631 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 HOXB9P17482 250 aaPredicted RBP24.82■■□□□ 1.56
CPNE1-216ENST00000437340 NTSR1P30989 418 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 KIR3DL1P43629 444 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 METRNLQ641Q3 311 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 PPP4R4Q6NUP7 873 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 LAS2Q8IYD9 372 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 GALNT4Q8N4A0 578 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 PACRGLQ8N7B6 248 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 EZH1Q92800 747 aaPredicted RBP24.82■■□□□ 1.56
CPNE1-216ENST00000437340 CENPNQ96H22 339 aaPredicted RBP24.82■■□□□ 1.56
CPNE1-216ENST00000437340 EGLN2Q96KS0 407 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 WDR26Q9H7D7 661 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 PCDHB14Q9Y5E9 798 aa24.82■■□□□ 1.56
CPNE1-216ENST00000437340 ANXA6P08133 673 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 ASMTP46597 345 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 POLE2P56282 527 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms