RNA–Protein interactions for RNA: ENST00000434684.1

PPARGC1B-205, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best)

Gene PPARGC1B, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-205ENST00000434684 KIF17Q9P2E2 1029 aa13.04□□□□□ -0.32
PPARGC1B-205ENST00000434684 OR2A25A4D2G3 310 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 PSMD11O00231 422 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 PCDHGA12O60330 932 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 WBP4O75554 376 aaKnown RBP13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 UPK1BO75841 260 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 KCNK2O95069 426 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 SLC25A14O95258 325 aaPredicted RBP13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 DBTP11182 482 aaKnown RBP13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 PAX3P23760 479 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 GTF2E2P29084 291 aaKnown RBP13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 PTPN6P29350 595 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 CTXN3Q4LDR2 81 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 C9orf50Q5SZB4 431 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 STEAP3Q658P3 488 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 ZCCHC8Q6NZY4 707 aaKnown RBP13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 ARMCX6Q7L4S7 300 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 TRIM46Q7Z4K8 759 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 SERPINA9Q86WD7 417 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 ATG16L2Q8NAA4 619 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 ADGRE3Q9BY15 652 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 ACPTQ9BZG2 426 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 GPR63Q9BZJ6 419 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 KRT84Q9NSB2 600 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 IL37Q9NZH6 218 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 NDRG4Q9ULP0 352 aaKnown RBP13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 PPT2Q9UMR5 302 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 ERVK-11Q9UQG0 969 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 OARD1Q9Y530 152 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 PCDHB9Q9Y5E1 797 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 A0A096LPI6 279 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 UPK3BL1B0FP48 263 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 UPK3BL2E5RIL1 263 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 H3BNC9 293 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 NDUFB5O43674 189 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 ACSL4O60488 711 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 PDYNP01213 254 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 RPL17P18621 184 aaKnown RBP13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 C21orf33P30042 268 aaPredicted RBP13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 NR4A2P43354 598 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 CXCR4P61073 352 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 RPP38P78345 283 aaKnown RBP13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 MVKQ03426 396 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 LRIF1Q5T3J3 769 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 OR4F3Q6IEY1 312 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 PRSS48Q7RTY5 328 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 DENND1CQ8IV53 801 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 DNASE1L2Q92874 299 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 DHRS1Q96LJ7 313 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 ZNF558Q96NG5 402 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 CLPBQ9H078 707 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 GABARAPL1Q9H0R8 117 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 TM9SF3Q9HD45 589 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 IL1RAPQ9NPH3 570 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 IL17CQ9P0M4 197 aa13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 SAMHD1Q9Y3Z3 626 aaKnown RBP13.03□□□□□ -0.32
PPARGC1B-205ENST00000434684 SYN3O14994 580 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 VIPP01282 170 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 RHOCP08134 193 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 CACNG1Q06432 222 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 ABHD18Q0P651 414 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 ARHGEF7Q14155 803 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 PLEKHG6Q3KR16 790 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 ZNF404Q494X3 552 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 SOWAHCQ53LP3 525 aaPredicted RBP13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 FAM109BQ6ICB4 259 aaPredicted RBP13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 SPRED2Q7Z698 418 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 HORMAD1Q86X24 394 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 CLIP4Q8N3C7 705 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 APH1BQ8WW43 257 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 HERVK_113Q902F9 699 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 DPH2Q9BQC3 489 aaPredicted RBP13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 TTPALQ9BTX7 342 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 RNF167Q9H6Y7 350 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 AASDHPPTQ9NRN7 309 aa13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 THG1LQ9NWX6 298 aaKnown RBP13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 SAMD4AQ9UPU9 718 aaKnown RBP13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 CAB39Q9Y376 341 aaPredicted RBP13.02□□□□□ -0.32
PPARGC1B-205ENST00000434684 GRXCR1A8MXD5 290 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 RFXANKO14593 260 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 WNT9AO14904 365 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 SNPHO15079 494 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 ADAM12O43184 909 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 CCNDBP1O95273 360 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 FKBP9O95302 570 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 FABP3P05413 133 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 MYOGP15173 224 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 EPB42P16452 691 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 IL1RNP18510 177 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 TCEA1P23193 301 aaKnown RBP13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 GADD45AP24522 165 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 DNAJA1P31689 397 aaKnown RBP13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 RING1Q06587 406 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 KIAA1614Q5VZ46 1190 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 AKAP14Q86UN6 197 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 SLC39A11Q8N1S5 342 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 STK40Q8N2I9 435 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 AUTS2Q8WXX7 1259 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 PROX1Q92786 737 aa13.02□□□□□ -0.33
PPARGC1B-205ENST00000434684 SLC38A4Q969I6 547 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms