RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 PAK5Q9P286 719 aa14.17□□□□□ -0.14
PRKDC-203ENST00000432581 TRPC4Q9UBN4 977 aa14.17□□□□□ -0.14
PRKDC-203ENST00000432581 SUCOQ9UBS9 1254 aaKnown RBP14.17□□□□□ -0.14
PRKDC-203ENST00000432581 IGHV1-45A0A0A0MS14 117 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 H0YGG7 62 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 AP3B1O00203 1094 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 NRP2O60462 931 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 CRYABP02511 175 aaKnown RBP14.16□□□□□ -0.14
PRKDC-203ENST00000432581 HEXBP07686 556 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 MYBL2P10244 700 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 ATP5DP30049 168 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 ARF3P61204 181 aaPredicted RBP14.16□□□□□ -0.14
PRKDC-203ENST00000432581 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.16□□□□□ -0.14
PRKDC-203ENST00000432581 SEL1L2Q5TEA6 688 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 GARNL3Q5VVW2 1013 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 FBXO42Q6P3S6 717 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 MTFR2Q6P444 385 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 GFRALQ6UXV0 394 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 LAPTM4BQ86VI4 370 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 MCEMP1Q8IX19 187 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 SIRT6Q8N6T7 355 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 CSNK1A1LQ8N752 337 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 CCDC89Q8N998 374 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 SMPDL3AQ92484 453 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 PHF12Q96QT6 1004 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 TAAR6Q96RI8 345 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 PLCD4Q9BRC7 762 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 ACAT2Q9BWD1 397 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 YIPF2Q9BWQ6 316 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 TGIF2Q9GZN2 237 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 IL22Q9GZX6 179 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 RNF32Q9H0A6 362 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.16□□□□□ -0.14
PRKDC-203ENST00000432581 MRPS30Q9NP92 439 aaKnown RBP14.16□□□□□ -0.14
PRKDC-203ENST00000432581 MKKSQ9NPJ1 570 aaPredicted RBP14.16□□□□□ -0.14
PRKDC-203ENST00000432581 TREX1Q9NSU2 369 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 UTP6Q9NYH9 597 aaKnown RBP14.16□□□□□ -0.14
PRKDC-203ENST00000432581 PLA2G3Q9NZ20 509 aa14.16□□□□□ -0.14
PRKDC-203ENST00000432581 STOX2Q9P2F5 926 aaPredicted RBP14.16□□□□□ -0.14
PRKDC-203ENST00000432581 RUVBL2Q9Y230 463 aaKnown RBP14.16□□□□□ -0.14
PRKDC-203ENST00000432581 KRT87PA6NCN2 255 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 H3BMM5 538 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 PFDN6O15212 129 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 CCNDBP1O95273 360 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 MATN4O95460 622 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 ANXA5P08758 320 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 ERGP11308 486 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 ICAM2P13598 275 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 EIF3BP55884 814 aaKnown RBP14.15□□□□□ -0.14
PRKDC-203ENST00000432581 SESN2P58004 480 aaPredicted RBP14.15□□□□□ -0.14
PRKDC-203ENST00000432581 EEF1A2Q05639 463 aaKnown RBP14.15□□□□□ -0.14
PRKDC-203ENST00000432581 FASTKQ14296 549 aaKnown RBP14.15□□□□□ -0.14
PRKDC-203ENST00000432581 ARHGAP19Q14CB8 494 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 ANKRD20A4Q4UJ75 823 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 RNF187Q5TA31 235 aaPredicted RBP14.15□□□□□ -0.14
PRKDC-203ENST00000432581 SDCCAG8Q86SQ7 713 aaPredicted RBP14.15□□□□□ -0.14
PRKDC-203ENST00000432581 OR9A1PQ8NGU1 263 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 DNAJB8Q8NHS0 232 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 SUN3Q8TAQ9 357 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 EIF2B3Q9NR50 452 aaKnown RBP14.15□□□□□ -0.14
PRKDC-203ENST00000432581 FAM114A2Q9NRY5 505 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 BFARQ9NZS9 450 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 ABI3Q9P2A4 366 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 RUVBL1Q9Y265 456 aaKnown RBP14.15□□□□□ -0.14
PRKDC-203ENST00000432581 APCP25054 2843 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 ZGRF1Q86YA3 2104 aa14.15□□□□□ -0.14
PRKDC-203ENST00000432581 LOC102723996A0A087X1L8 192 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 TRGV8A0A0C4DH27 118 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 ZNF839A8K0R7 811 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 TXNDC9O14530 226 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 RASAL1O95294 804 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 PKMP14618 531 aaKnown RBP14.14□□□□□ -0.15
PRKDC-203ENST00000432581 ETS1P14921 441 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 RPA3P35244 121 aaPredicted RBP14.14□□□□□ -0.15
PRKDC-203ENST00000432581 HSD17B2P37059 387 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 SLC26A3P40879 764 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 ZNF75DP51815 510 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 GBX1Q14549 363 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 CTSL3PQ5NE16 218 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 MRNIPQ6NTE8 343 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 TMEM207Q6UWW9 146 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 RPTNQ6XPR3 784 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 PAQR7Q86WK9 346 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 OTUD6BQ8N6M0 293 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 AMER3Q8N944 861 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 C1orf54Q8WWF1 131 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 ITLN2Q8WWU7 325 aaPredicted RBP14.14□□□□□ -0.15
PRKDC-203ENST00000432581 RERGQ96A58 199 aaPredicted RBP14.14□□□□□ -0.15
PRKDC-203ENST00000432581 MMABQ96EY8 250 aaPredicted RBP14.14□□□□□ -0.15
PRKDC-203ENST00000432581 BIRC8Q96P09 236 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 ZNF700Q9H0M5 742 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 CHST11Q9NPF2 352 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 TEKT2Q9UIF3 430 aa14.14□□□□□ -0.15
PRKDC-203ENST00000432581 ANKRD17O75179 2603 aaKnown RBP14.13□□□□□ -0.15
PRKDC-203ENST00000432581 MYO1CO00159 1063 aa14.13□□□□□ -0.15
PRKDC-203ENST00000432581 UNC5CO95185 931 aa14.13□□□□□ -0.15
PRKDC-203ENST00000432581 WDPCPO95876 746 aa14.13□□□□□ -0.15
PRKDC-203ENST00000432581 ESR1P03372 595 aa14.13□□□□□ -0.15
PRKDC-203ENST00000432581 EZRP15311 586 aaKnown RBP14.13□□□□□ -0.15
PRKDC-203ENST00000432581 NMBRP28336 390 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms