RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 EZRP15311 586 aaKnown RBP10.59□□□□□ -0.71
CHD4-202ENST00000430771 CXCR2P25025 360 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 CCR8P51685 355 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 CCNG1P51959 295 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 PDX1P52945 283 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 CFHR1Q03591 330 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 CLCQ05315 142 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 LCP2Q13094 533 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 PUM1Q14671 1186 aaKnown RBP eCLIP10.59□□□□□ -0.71
CHD4-202ENST00000430771 RBBP7Q16576 425 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 ZXDCQ2QGD7 858 aaPredicted RBP10.59□□□□□ -0.71
CHD4-202ENST00000430771 PAGE2BQ5JRK9 111 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 TMTC4Q5T4D3 741 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 CDCP2Q5VXM1 449 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 KIAA1614Q5VZ46 1190 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 NUDCD3Q8IVD9 361 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 CCNYL1Q8N7R7 359 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 RAB3IL1Q8TBN0 382 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 ATP6V1E2Q96A05 226 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 OR4K3Q96R72 315 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 AIF1LQ9BQI0 150 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 DPH7Q9BTV6 452 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 TRMOQ9BU70 441 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 EFCAB11Q9BUY7 163 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 MECRQ9BV79 373 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 DRC3Q9H069 523 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 EHD1Q9H4M9 534 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 FANCEQ9HB96 536 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 MLXIPLQ9NP71 852 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 SLC6A20Q9NP91 592 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 SEMA4BQ9NPR2 832 aaPredicted RBP10.59□□□□□ -0.71
CHD4-202ENST00000430771 DLL3Q9NYJ7 618 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 TMEM9Q9P0T7 183 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 SEMA5BQ9P283 1151 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 PDP2Q9P2J9 529 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 SNX7Q9UNH6 387 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 CLCA2Q9UQC9 943 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 ASB1Q9Y576 335 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 KLK4Q9Y5K2 254 aa10.59□□□□□ -0.71
CHD4-202ENST00000430771 PCNX2A6NKB5 2137 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 CEP250Q9BV73 2442 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 OR2A25A4D2G3 310 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 TMEM114B3SHH9 223 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 NPHS1O60500 1241 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 CSO75390 466 aaKnown RBP10.58□□□□□ -0.72
CHD4-202ENST00000430771 SNUPNO95149 360 aaKnown RBP10.58□□□□□ -0.72
CHD4-202ENST00000430771 MT-CO3P00414 261 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 SERPINE1P05121 402 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 HOXB3P14651 431 aaPredicted RBP10.58□□□□□ -0.72
CHD4-202ENST00000430771 CHN1P15882 459 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 ST6GAL1P15907 406 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 NPPBP16860 134 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 MPSTP25325 297 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 CSTF2P33240 577 aaKnown RBP eCLIP10.58□□□□□ -0.72
CHD4-202ENST00000430771 GRIA3P42263 894 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 HSD11B2P80365 405 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 REEP5Q00765 189 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 IRF8Q02556 426 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 EIF3IQ13347 325 aaKnown RBP10.58□□□□□ -0.72
CHD4-202ENST00000430771 LAPTM5Q13571 262 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 MPP2Q14168 576 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 TBCCQ15814 346 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 GGTA1PQ4G0N0 100 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 UNC50Q53HI1 259 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 XKR6Q5GH73 641 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 ATG9BQ674R7 924 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 ZNF425Q6IV72 752 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 NXPE4Q6UWF7 544 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 FRMD7Q6ZUT3 714 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 RNF44Q7L0R7 432 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 TMPRSS9Q7Z410 1059 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 SLCO6A1Q86UG4 719 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 TMPRSS12Q86WS5 348 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 HOMEZQ8IX15 550 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 KIRREL3Q8IZU9 778 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 CACTIN-AS1Q8N1I8 211 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 KRT78Q8N1N4 520 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 GALNT15Q8N3T1 639 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 ABHD11Q8NFV4 315 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 FAM76AQ8TAV0 307 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 ADAMTS14Q8WXS8 1223 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 NEIL2Q969S2 332 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 UBE2E3Q969T4 207 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 ZUFSPQ96AP4 578 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 PTCD3Q96EY7 689 aaKnown RBP10.58□□□□□ -0.72
CHD4-202ENST00000430771 TCTN2Q96GX1 697 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 LIN37Q96GY3 246 aaPredicted RBP10.58□□□□□ -0.72
CHD4-202ENST00000430771 TRAPPC9Q96Q05 1148 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 ZNF382Q96SR6 550 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 PLCD4Q9BRC7 762 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 PITHD1Q9GZP4 211 aaPredicted RBP10.58□□□□□ -0.72
CHD4-202ENST00000430771 CHRNA10Q9GZZ6 450 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 IPPKQ9H8X2 491 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 ACTR8Q9H981 624 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 EML4Q9HC35 981 aaKnown RBP10.58□□□□□ -0.72
CHD4-202ENST00000430771 PDE7BQ9NP56 450 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 INTS9Q9NV88 658 aaKnown RBP10.58□□□□□ -0.72
CHD4-202ENST00000430771 TMEM184CQ9NVA4 438 aa10.58□□□□□ -0.72
CHD4-202ENST00000430771 CUEDC1Q9NWM3 386 aaPredicted RBP10.58□□□□□ -0.72
CHD4-202ENST00000430771 SH2B3Q9UQQ2 575 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms