RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 A0A1W2PS18 150 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 IFITM10A6NMD0 228 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 PRSS46E5RG02 174 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZNF587BE7ETH6 402 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 FLRT2O43155 660 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 TSPAN1O60635 241 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZNF432O94892 652 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 TGFAP01135 160 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 IFNB1P01574 187 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 DLATP10515 647 aaKnown RBP2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 MYOD1P15172 320 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 EPCAMP16422 314 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 CBLP22681 906 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 JAK1P23458 1154 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 SLC6A6P31641 620 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 SOAT1P35610 550 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 PSMC4P43686 418 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 MMP15P51511 669 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 CTSCP53634 463 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 MFAP3P55082 362 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 PITX1P78337 314 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 RELQ04864 619 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 SLC20A2Q08357 652 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 VEZF1Q14119 521 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 PTGISQ16647 500 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 CA9Q16790 459 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 UGP2Q16851 508 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 TWISTNBQ3B726 338 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 FAM76BQ5HYJ3 339 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 SPDYCQ5MJ68 293 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 ETFRF1Q6IPR1 90 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 CASC1Q6TDU7 716 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 PLXDC2Q6UX71 529 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 FOXL2NBQ6ZUU3 175 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 C9orf139Q6ZV77 190 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 IL17RELQ6ZVW7 336 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 PRSS42Q7Z5A4 293 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZNF410Q86VK4 478 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 TMPRSS12Q86WS5 348 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 SIAH3Q8IW03 269 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 ODF3L1Q8IXM7 274 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 C1orf87Q8N0U7 546 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 CRYBG2Q8N1P7 616 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 HDDC3Q8N4P3 179 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 METTL27Q8N6F8 245 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZNF611Q8N823 705 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 MAB21L3Q8N8X9 362 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 MRPL43Q8N983 215 aaKnown RBP2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 L3MBTL4Q8NA19 623 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 KIAA0895Q8NCT3 520 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZNF540Q8NDQ6 660 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 NCOA7Q8NI08 942 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 FGFBP3Q8TAT2 258 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 KIAA1524Q8TCG1 905 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 CD101Q93033 1021 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 ABTB1Q969K4 478 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 PIGTQ969N2 578 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 AP2M1Q96CW1 435 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 MYADMQ96S97 322 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZNF577Q9BSK1 485 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 CSTL1Q9H114 145 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 Q9H8V8 135 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 SYTL2Q9HCH5 934 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 ACKR4Q9NPB9 350 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 PRMT8Q9NR22 394 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 SLCO1C1Q9NYB5 712 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 TAS2R3Q9NYW6 316 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 XPO7Q9UIA9 1087 aaKnown RBP2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 TRMT6Q9UJA5 497 aaKnown RBP2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 SH3BGRL2Q9UJC5 107 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 FBXL5Q9UKA1 691 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 KCNS2Q9ULS6 477 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 RABL2BQ9UNT1 228 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 CHKBQ9Y259 395 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 WDR83OSQ9Y284 106 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 CLCA3PQ9Y6N3 262 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 ATP8B3O60423 1300 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 PDS5AQ29RF7 1337 aaKnown RBP2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 TRIP12Q14669 1992 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 RNF103-CHMP3A0A140T963 221 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 A0A1W2PPW3 197 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 ASPDHA6ND91 283 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 OR5K3A6NET4 321 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 CASTOR2A6NHX0 329 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 SLC9B1P1A6NJY1 282 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 SDR42E2A6NKP2 422 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 KPNA7A9QM74 516 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 KBTBD13C9JR72 458 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 TLR4O00206 839 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 RNF103O00237 685 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 BMPR1BO00238 502 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 WDR1O75083 606 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 PDGFBP01127 241 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 GHRP10912 638 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 CETPP11597 493 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 SKILP12757 684 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 CDH1P12830 882 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 ITGA2P17301 1181 aa2.75□□□□□ -1.97
HMGB1P9-201ENST00000429856 SLC9A3P48764 834 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms