RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 SEC24DO94855 1032 aaPredicted RBP11.09□□□□□ -0.63
CECR3-201ENST00000428828 PCDH8O95206 1070 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 SNX4O95219 450 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 APBB3O95704 486 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 CYP2A6P11509 494 aaPredicted RBP11.09□□□□□ -0.63
CECR3-201ENST00000428828 CRHBPP24387 322 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 VIPR1P32241 457 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 MMP12P39900 470 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 TPMTP51580 245 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 BNC1Q01954 994 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 CLCQ05315 142 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 SMU1Q2TAY7 513 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 LDLRAP1Q5SW96 308 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 LCN8Q6JVE9 175 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 NEK5Q6P3R8 708 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 TMEM105Q8N8V8 129 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 PAPD5Q8NDF8 572 aaKnown RBP11.09□□□□□ -0.63
CECR3-201ENST00000428828 OR7A2PQ8NGA2 310 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 OR13C4Q8NGS5 318 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 CANT1Q8WVQ1 401 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 RLN3Q8WXF3 142 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 JPH3Q8WXH2 748 aaPredicted RBP11.09□□□□□ -0.63
CECR3-201ENST00000428828 ZNF669Q96BR6 464 aaPredicted RBP11.09□□□□□ -0.63
CECR3-201ENST00000428828 DACH2Q96NX9 599 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 DEPDC7Q96QD5 511 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 MCCC1Q96RQ3 725 aaPredicted RBP11.09□□□□□ -0.63
CECR3-201ENST00000428828 CHID1Q9BWS9 393 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 ZFYVE1Q9HBF4 777 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 TMEM216Q9P0N5 145 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 NCKAP1Q9Y2A7 1128 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 CAB39Q9Y376 341 aaPredicted RBP11.09□□□□□ -0.63
CECR3-201ENST00000428828 COPG1Q9Y678 874 aaKnown RBP11.09□□□□□ -0.63
CECR3-201ENST00000428828 THADAQ6YHU6 1953 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 DHRS12A0PJE2 317 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 G3V2L1 256 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 ELFN1P0C7U0 828 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 PSMA4P25789 261 aaKnown RBP11.09□□□□□ -0.63
CECR3-201ENST00000428828 NMBRP28336 390 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 OR3A3P47888 321 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 TAS2R38P59533 333 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 ELP6Q0PNE2 266 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 RALGDSQ12967 914 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 ACOX1Q15067 660 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 YIF1BQ5BJH7 314 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 PCID2Q5JVF3 399 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 TBCELQ5QJ74 424 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 PRMT9Q6P2P2 845 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 TRMT10BQ6PF06 316 aaKnown RBP11.09□□□□□ -0.63
CECR3-201ENST00000428828 DPPA4Q7L190 304 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 GLRX5Q86SX6 157 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 RAVER1Q8IY67 606 aaKnown RBP11.09□□□□□ -0.63
CECR3-201ENST00000428828 FAM160A2Q8N612 972 aaPredicted RBP11.09□□□□□ -0.63
CECR3-201ENST00000428828 FRMD1Q8N878 549 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 FAM156AQ8NDB6 213 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 TRPV3Q8NET8 790 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 IL17RDQ8NFM7 739 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 OR13J1Q8NGT2 312 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 DYNC2LI1Q8TCX1 351 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 BRSK1Q8TDC3 778 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 CXorf40AQ8TE69 158 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 ROPN1LQ96C74 230 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 MFSD3Q96ES6 412 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 CENPOQ9BU64 300 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 TNFRSF10DQ9UBN6 386 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 SLC2A6Q9UGQ3 507 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 CD84Q9UIB8 345 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 ANAPC2Q9UJX6 822 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 SCML1Q9UN30 329 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 INVSQ9Y283 1065 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 PPIL1Q9Y3C6 166 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 GRIP1Q9Y3R0 1128 aa11.09□□□□□ -0.63
CECR3-201ENST00000428828 TP53BP1Q12888 1972 aaPredicted RBP11.08□□□□□ -0.64
CECR3-201ENST00000428828 C2orf81A6NN90 581 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 M0R3G1 203 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 LDB2O43679 373 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 MMP20O60882 483 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 C1SP09871 688 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 CD1EP15812 388 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 PGAM1P18669 254 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 HTR1BP28222 390 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 ACSL1P33121 698 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 CLCN5P51795 746 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 ATXN3P54252 364 aaPredicted RBP11.08□□□□□ -0.64
CECR3-201ENST00000428828 ADPRHP54922 357 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 TAF1AQ15573 450 aaPredicted RBP11.08□□□□□ -0.64
CECR3-201ENST00000428828 TYSND1Q2T9J0 566 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 ZFP69Q49AA0 526 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 PAGE2BQ5JRK9 111 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 PIWIL3Q7Z3Z3 882 aaKnown RBP11.08□□□□□ -0.64
CECR3-201ENST00000428828 ZBTB46Q86UZ6 589 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 HORMAD1Q86X24 394 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 PELI3Q8N2H9 469 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 BEND7Q8N7W2 519 aaPredicted RBP11.08□□□□□ -0.64
CECR3-201ENST00000428828 OR4K2Q8NGD2 314 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 EID2BQ96D98 161 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 NPAS2Q99743 824 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 TMEM246Q9BRR3 403 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 NAT9Q9BTE0 207 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 DSN1Q9H410 356 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 WDR55Q9H6Y2 383 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms