RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 PLXDC1Q8IUK5 500 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 LSMEM2Q8N112 164 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 TBC1D19Q8N5T2 526 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 ZNF781Q8N8C0 355 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 CDYL2Q8N8U2 506 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 OR4F6Q8NGB9 312 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 OR2A1Q8NGT9 310 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 OR6Y1Q8NGX8 325 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 GRAMD1AQ96CP6 724 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 PTCD3Q96EY7 689 aaKnown RBP7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 CHMP6Q96FZ7 201 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 ZDHHC12Q96GR4 267 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 C7orf26Q96N11 449 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 PRAP1Q96NZ9 151 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 CD180Q99467 661 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 SORT1Q99523 831 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 CDC6Q99741 560 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 NUDT22Q9BRQ3 303 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 DPH7Q9BTV6 452 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 EFCAB11Q9BUY7 163 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 FAM107BQ9H098 131 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 ILKAPQ9H0C8 392 aaPredicted RBP7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 CCDC134Q9H6E4 229 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 PELI2Q9HAT8 420 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 FGFR1OP2Q9NVK5 253 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 SOHLH2Q9NX45 425 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 KLHL20Q9Y2M5 609 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 RAP2CQ9Y3L5 183 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 FANCMQ8IYD8 2048 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 PIKFYVEQ9Y2I7 2098 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 OTOGLQ3ZCN5 2332 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 A0A0J9YY10 115 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 A0A1B0GTL3 188 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 TLCD2A6NGC4 264 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 HAT1O14929 419 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 HGSO14964 777 aaPredicted RBP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 AZIN1O14977 448 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 B4GAT1O43505 415 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 TNFSF14O43557 240 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 KIF1CO43896 1103 aaKnown RBP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 PRICKLE3O43900 615 aaPredicted RBP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 UGDHO60701 494 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 OR4F21O95013 312 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 FKBP9O95302 570 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 CPNE6O95741 557 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 CHEK2O96017 543 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 CAPN1P07384 714 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 EBLN1P0CF75 366 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 C1GALT1C1LP0DN25 315 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 KITP10721 976 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 PCNAP12004 261 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 HGFP14210 728 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 ACP1P24666 158 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 CD1CP29017 333 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 PRDX3P30048 256 aaKnown RBP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 HMOX2P30519 316 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 GRK3P35626 688 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 ARL4DP49703 201 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 ACADVLP49748 655 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 ERVPABLB-1P60509 514 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 CSNK1G2P78368 415 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 CCL7P80098 99 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 REEP5Q00765 189 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 MEF2AQ02078 507 aaPredicted RBP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 CYP4F3Q08477 520 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 IFT88Q13099 833 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 DDX39BQ13838 428 aaKnown RBP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 ZRSR2Q15696 482 aaKnown RBP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 TBCCQ15814 346 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 CPSF6Q16630 551 aaKnown RBP eCLIP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 TUBB8Q3ZCM7 444 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 SGO1Q5FBB7 561 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 KIAA1614Q5VZ46 1190 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 FAM219BQ5XKK7 198 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 ATG9BQ674R7 924 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 CLEC6AQ6EIG7 209 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 GRHL2Q6ISB3 625 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 DBX2Q6ZNG2 339 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 KIAA2013Q8IYS2 634 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 LRRC34Q8IZ02 419 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 KIRREL3Q8IZU9 778 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 KRT78Q8N1N4 520 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 C19orf47Q8N9M1 422 aaKnown RBP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 ABHD11Q8NFV4 315 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 FLVCR1-AS1Q8TAF5 88 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 BAHD1Q8TBE0 780 aaPredicted RBP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 METTL6Q8TCB7 284 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 CCT6BQ92526 530 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 PRR11Q96HE9 360 aaPredicted RBP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 FAR2Q96K12 515 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 MAGEB10Q96LZ2 347 aaPredicted RBP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 PPM1MQ96MI6 270 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 KCNA7Q96RP8 456 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 MAP3K3Q99759 626 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 AIF1LQ9BQI0 150 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 SLC29A3Q9BZD2 475 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 C20orf27Q9GZN8 174 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 NSRP1Q9H0G5 558 aaKnown RBP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 ABCG4Q9H172 646 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 SPNS1Q9H2V7 528 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms