RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 HKDC1Q2TB90 917 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 ANKRD20A4Q4UJ75 823 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 RNF187Q5TA31 235 aaPredicted RBP14.79□□□□□ -0.04
SEC13-210ENST00000428626 ATG9BQ674R7 924 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 ZNF425Q6IV72 752 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 LURAP1LQ8IV03 231 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 REXO1L1PQ8IX06 675 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 LRRC56Q8IYG6 542 aaPredicted RBP14.79□□□□□ -0.04
SEC13-210ENST00000428626 PPP4R1Q8TF05 950 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 MAIP1Q8WWC4 291 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 THOC3Q96J01 351 aaKnown RBP14.79□□□□□ -0.04
SEC13-210ENST00000428626 MS4A14Q96JA4 679 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 PLCD4Q9BRC7 762 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 CRB3Q9BUF7 120 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 TAC3Q9UHF0 121 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 NXT1Q9UKK6 140 aaKnown RBP14.79□□□□□ -0.04
SEC13-210ENST00000428626 RUVBL1Q9Y265 456 aaKnown RBP14.79□□□□□ -0.04
SEC13-210ENST00000428626 NEU2Q9Y3R4 380 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 FAM169AQ9Y6X4 670 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 CRYBG3Q68DQ2 2970 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 CELSR2Q9HCU4 2923 aa14.79□□□□□ -0.04
SEC13-210ENST00000428626 ANKUB1A6NFN9 424 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 H3BMM5 538 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 E2F3O00716 465 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 P2RX6O15547 441 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 SLC16A8O95907 504 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 KRT14P02533 472 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 CMPK1P30085 196 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 CUL1Q13616 776 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 AGAP7PQ5VUJ5 663 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 ZNF470Q6ECI4 717 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 CYHR1Q6ZMK1 362 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 LRRC8AQ8IWT6 810 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 RAB42Q8N4Z0 105 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 AMER3Q8N944 861 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 CATSPER1Q8NEC5 780 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 TRIM58Q8NG06 486 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 DNAJB14Q8TBM8 379 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 MAGEC3Q8TD91 643 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 ZNF480Q8WV37 535 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 SMPDL3AQ92484 453 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 PSMF1Q92530 271 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 TM9SF4Q92544 642 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 ZNF669Q96BR6 464 aaPredicted RBP14.78□□□□□ -0.04
SEC13-210ENST00000428626 MIEF2Q96C03 454 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 AGAP4Q96P64 663 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 OR2A5Q96R48 311 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 LHPPQ9H008 270 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 ZNF160Q9HCG1 818 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 MRPS30Q9NP92 439 aaKnown RBP14.78□□□□□ -0.04
SEC13-210ENST00000428626 FBXO6Q9NRD1 293 aaPredicted RBP14.78□□□□□ -0.04
SEC13-210ENST00000428626 ZNF282Q9UDV7 671 aaPredicted RBP14.78□□□□□ -0.04
SEC13-210ENST00000428626 C3orf18Q9UK00 162 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 MRFAP1Q9Y605 127 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 CROCCQ5TZA2 2017 aa14.78□□□□□ -0.04
SEC13-210ENST00000428626 FAM237BA0A1B0GVD1 139 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 E7ENX8 843 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 GOLGA8MH3BSY2 632 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 FOXS1O43638 330 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 KLHL41O60662 606 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 USP1O94782 785 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 DDAH2O95865 285 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 CELA2AP08217 269 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 PNLIPRP1P54315 467 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 TAP2Q03519 686 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 PRDX1Q06830 199 aaKnown RBP14.77□□□□□ -0.05
SEC13-210ENST00000428626 TSTA3Q13630 321 aaPredicted RBP14.77□□□□□ -0.05
SEC13-210ENST00000428626 DHX34Q14147 1143 aaKnown RBP14.77□□□□□ -0.05
SEC13-210ENST00000428626 SYT16Q17RD7 645 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 MUM1Q2TAK8 710 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 ICE2Q659A1 982 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 ZNF787Q6DD87 383 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 PRMT9Q6P2P2 845 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 CASC4Q6P4E1 433 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 LINC00696Q6ZRV3 163 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 KCNMB4Q86W47 210 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 PLD3Q8IV08 490 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 RASGEF1CQ8N431 466 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 CABS1Q96KC9 395 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 SERPINB12Q96P63 405 aa14.77□□□□□ -0.05
SEC13-210ENST00000428626 MRPS2Q9Y399 296 aaKnown RBP14.77□□□□□ -0.05
SEC13-210ENST00000428626 GOLGA6L6A8MZA4 724 aa14.76□□□□□ -0.05
SEC13-210ENST00000428626 E5RI56 91 aa14.76□□□□□ -0.05
SEC13-210ENST00000428626 KIF5CO60282 957 aa14.76□□□□□ -0.05
SEC13-210ENST00000428626 HPP00738 406 aa14.76□□□□□ -0.05
SEC13-210ENST00000428626 STATHP02808 62 aa14.76□□□□□ -0.05
SEC13-210ENST00000428626 CATP04040 527 aaKnown RBP14.76□□□□□ -0.05
SEC13-210ENST00000428626 COX6A1P12074 109 aa14.76□□□□□ -0.05
SEC13-210ENST00000428626 ACPPP15309 386 aa14.76□□□□□ -0.05
SEC13-210ENST00000428626 FBLP22087 321 aaKnown RBP14.76□□□□□ -0.05
SEC13-210ENST00000428626 RPA3P35244 121 aaPredicted RBP14.76□□□□□ -0.05
SEC13-210ENST00000428626 SLC1A2P43004 574 aa14.76□□□□□ -0.05
SEC13-210ENST00000428626 MAGEA3P43357 314 aa14.76□□□□□ -0.05
SEC13-210ENST00000428626 TSFMP43897 325 aaKnown RBP14.76□□□□□ -0.05
SEC13-210ENST00000428626 TIAL1Q01085 375 aaKnown RBP eCLIP14.76□□□□□ -0.05
SEC13-210ENST00000428626 OCA2Q04671 838 aa14.76□□□□□ -0.05
SEC13-210ENST00000428626 DSG2Q14126 1118 aa14.76□□□□□ -0.05
SEC13-210ENST00000428626 ARHGAP19Q14CB8 494 aa14.76□□□□□ -0.05
SEC13-210ENST00000428626 CSNK1A1LQ8N752 337 aa14.76□□□□□ -0.05
SEC13-210ENST00000428626 GRHL3Q8TE85 626 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms