RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 ZNF599Q96NL3 588 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 ELAC1Q9H777 363 aaKnown RBP9.48□□□□□ -0.89
SNX13-203ENST00000428135 S100A14Q9HCY8 104 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 TMEM248Q9NWD8 314 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 PHF11Q9UIL8 331 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 FAM227AF5H4B4 570 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 TSPAN6O43657 245 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 JUNDP17535 347 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 BMPR1AP36894 532 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 MNDAP41218 407 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 ARFIP1P53367 373 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 CARTPTQ16568 116 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 FAM131AQ6UXB0 335 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 ERN2Q76MJ5 926 aaKnown RBP9.48□□□□□ -0.89
SNX13-203ENST00000428135 SLC9B2Q86UD5 537 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 DCAF4L2Q8NA75 395 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 MYLIPQ8WY64 445 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 DHRS1Q96LJ7 313 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 TFB2MQ9H5Q4 396 aaKnown RBP9.48□□□□□ -0.89
SNX13-203ENST00000428135 EIF2B3Q9NR50 452 aaKnown RBP9.48□□□□□ -0.89
SNX13-203ENST00000428135 CKLFQ9UBR5 152 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 MALT1Q9UDY8 824 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 PIAS3Q9Y6X2 628 aa9.48□□□□□ -0.89
SNX13-203ENST00000428135 WWP2O00308 870 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 MID1O15344 667 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 PRAMEF11O60813 436 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 RSL1D1O76021 490 aaKnown RBP9.47□□□□□ -0.89
SNX13-203ENST00000428135 KAT7O95251 611 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 HEXBP07686 556 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 SP140Q13342 867 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 ENPP2Q13822 863 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 IL18Q14116 193 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 ARMC3Q5W041 872 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 ZDHHC24Q6UX98 284 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 CAND1Q86VP6 1230 aaKnown RBP9.47□□□□□ -0.89
SNX13-203ENST00000428135 BANPQ8N9N5 519 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 OR4K17Q8NGC6 315 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 KCNC2Q96PR1 638 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 NPY6RQ99463 290 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 SPATA9Q9BWV2 254 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 RAB11FIP5Q9BXF6 653 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 NID2Q14112 1375 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 PRODHO43272 600 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 DNAJA2O60884 412 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 RPP14O95059 124 aaKnown RBP9.47□□□□□ -0.89
SNX13-203ENST00000428135 SNUPNO95149 360 aaKnown RBP9.47□□□□□ -0.89
SNX13-203ENST00000428135 FHP07954 510 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 RIPK1Q13546 671 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 DHCR24Q15392 516 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 FRG2Q64ET8 278 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 ERICH5Q6P6B1 374 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 FAM92BQ6ZTR7 304 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 CAMKVQ8NCB2 501 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 SLC35B2Q8TB61 432 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 FAR1Q8WVX9 515 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 ZBED3Q96IU2 234 aaPredicted RBP9.47□□□□□ -0.89
SNX13-203ENST00000428135 FRG2BQ96QU4 278 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 KCNH6Q9H252 994 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 GPR34Q9UPC5 381 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 CPNE3O75131 537 aaKnown RBP9.47□□□□□ -0.89
SNX13-203ENST00000428135 IL33O95760 270 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 ADH1BP00325 375 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 CSNK2A2P19784 350 aaPredicted RBP9.47□□□□□ -0.89
SNX13-203ENST00000428135 C4BPBP20851 252 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 INAVAQ3KP66 663 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 AGTRAPQ6RW13 159 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 ATG14Q6ZNE5 492 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 OR2AJ1Q8NGZ0 328 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 EFHD2Q96C19 240 aaPredicted RBP9.47□□□□□ -0.89
SNX13-203ENST00000428135 NSMCE3Q96MG7 304 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 PRICKLE1Q96MT3 831 aaPredicted RBP9.47□□□□□ -0.89
SNX13-203ENST00000428135 OR52B2Q96RD2 323 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 CCDC28BQ9BUN5 200 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 RHCGQ9UBD6 479 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 CORO1CQ9ULV4 474 aaPredicted RBP9.47□□□□□ -0.89
SNX13-203ENST00000428135 SLC35F4A4IF30 521 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 PRPS2P11908 318 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 CCR3P51677 355 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 UFM1P61960 85 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 FAM180BQ6P0A1 224 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 PQLC3Q8N755 202 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 OR9I1Q8NGQ6 314 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 NFKBIDQ8NI38 313 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 GIPC3Q8TF64 312 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 OVCA2Q8WZ82 227 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 HHIPQ96QV1 700 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 CHCHD6Q9BRQ6 235 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 OSBPL11Q9BXB4 747 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 HAPLN2Q9GZV7 340 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 CYTH4Q9UIA0 394 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 GNEQ9Y223 722 aaKnown RBP9.47□□□□□ -0.89
SNX13-203ENST00000428135 SESN1Q9Y6P5 492 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 C4AP0C0L4 1744 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 ZNF726A6NNF4 738 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 FMO3P31513 532 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 FOXN2P32314 431 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 IL12RB1P42701 662 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 WNT7BP56706 349 aa9.47□□□□□ -0.89
SNX13-203ENST00000428135 ZNF267Q14586 743 aaPredicted RBP9.47□□□□□ -0.89
SNX13-203ENST00000428135 LAPTM4AQ15012 233 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms