RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 DUPD1Q68J44 220 aa17.52■□□□□ 0.4
SMARCAL1-205ENST00000425815 MBOAT1Q6ZNC8 495 aa17.52■□□□□ 0.4
SMARCAL1-205ENST00000425815 ARHGEF39Q8N4T4 335 aa17.52■□□□□ 0.4
SMARCAL1-205ENST00000425815 GABPB2Q8TAK5 448 aaPredicted RBP17.52■□□□□ 0.4
SMARCAL1-205ENST00000425815 OR2A5Q96R48 311 aa17.52■□□□□ 0.4
SMARCAL1-205ENST00000425815 MCMBPQ9BTE3 642 aa17.52■□□□□ 0.4
SMARCAL1-205ENST00000425815 TRIM4Q9C037 500 aa17.52■□□□□ 0.4
SMARCAL1-205ENST00000425815 PARVBQ9HBI1 364 aa17.52■□□□□ 0.4
SMARCAL1-205ENST00000425815 SMYD2Q9NRG4 433 aa17.52■□□□□ 0.4
SMARCAL1-205ENST00000425815 CUEDC1Q9NWM3 386 aaPredicted RBP17.52■□□□□ 0.4
SMARCAL1-205ENST00000425815 ANKMY1Q9P2S6 941 aa17.52■□□□□ 0.4
SMARCAL1-205ENST00000425815 GPN3Q9UHW5 284 aaPredicted RBP17.52■□□□□ 0.4
SMARCAL1-205ENST00000425815 SEC16AO15027 2179 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 SLC16A5O15375 505 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 PIAS1O75925 651 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 ZIC2O95409 532 aaPredicted RBP17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 C8GP07360 202 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 OTX2P32243 289 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 SNRPNP63162 240 aaKnown RBP17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 MGAT5Q09328 741 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 TRADDQ15628 312 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 FAM214AQ32MH5 1076 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 ASB18Q6ZVZ8 466 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 METTL27Q8N6F8 245 aaPredicted RBP17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 GPATCH11Q8N954 259 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 TTC29Q8NA56 475 aaPredicted RBP17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 MCOLN3Q8TDD5 553 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 PTERQ96BW5 349 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 LINGO1Q96FE5 620 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 C10orf90Q96M02 699 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 CCDC138Q96M89 665 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 SLC26A1Q9H2B4 701 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 DPH5Q9H2P9 285 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 ACSS2Q9NR19 701 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 ABCF3Q9NUQ8 709 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 WHRNQ9P202 907 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 NDOR1Q9UHB4 597 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 PADI2Q9Y2J8 665 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 TENM4Q6N022 2769 aa17.51■□□□□ 0.39
SMARCAL1-205ENST00000425815 H7BY64 318 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 MASP2O00187 686 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 ALBP02768 609 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 EIF2S1P05198 315 aaKnown RBP17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 CD63P08962 238 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 FOLR3P41439 243 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 RGS4P49798 205 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 ABATP80404 500 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 RELAQ04206 551 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 NAA25Q14CX7 972 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 NKG7Q16617 165 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 LRRC8EQ6NSJ5 796 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 MED25Q71SY5 747 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 MAATS1Q7Z4T9 603 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 PPP1R32Q7Z5V6 425 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 MRGPREQ86SM8 312 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 ZC3HC1Q86WB0 502 aaKnown RBP17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 ZBED8Q8IZ13 594 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 BBOF1Q8ND07 529 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 FDCSPQ8NFU4 85 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 FKBP10Q96AY3 582 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 PRAP1Q96NZ9 151 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 SPSB2Q99619 263 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 EPN3Q9H201 632 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 ANAPC2Q9UJX6 822 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 CORO1CQ9ULV4 474 aaPredicted RBP17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 SH2B3Q9UQQ2 575 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 PCDHGA9Q9Y5G4 932 aaKnown RBP17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 MAU2Q9Y6X3 613 aa17.5■□□□□ 0.39
SMARCAL1-205ENST00000425815 VSTM2BA6NLU5 285 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 HAT1O14929 419 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 CCNDBP1O95273 360 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 CASRP41180 1078 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 IL2P60568 153 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 SP140Q13342 867 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 HKDC1Q2TB90 917 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 FAM45BPQ6NSW5 357 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 AGTRAPQ6RW13 159 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 ZNF572Q7Z3I7 529 aaPredicted RBP17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 STRA8Q7Z7C7 330 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 RAB43Q86YS6 212 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 PLD3Q8IV08 490 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 MYO1HQ8N1T3 1032 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 TMEM102Q8N9M5 508 aaPredicted RBP17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 FAM45AQ8TCE6 357 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 PDLIM5Q96HC4 596 aaKnown RBP17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 SLC25A23Q9BV35 468 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 NUDT9Q9BW91 350 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 ATG10Q9H0Y0 220 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 CTSFQ9UBX1 484 aa17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 RUVBL1Q9Y265 456 aaKnown RBP17.49■□□□□ 0.39
SMARCAL1-205ENST00000425815 FER1L5A0AVI2 2057 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 A6NL46 340 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 CXorf49A8MYA2 514 aaPredicted RBP17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 WISP1O95388 367 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 C1QAP02745 245 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 SSTR1P30872 391 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 EMP3P54852 163 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 TBPL1P62380 186 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 TLE1Q04724 770 aa17.48■□□□□ 0.39
SMARCAL1-205ENST00000425815 KLRB1Q12918 225 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms