RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CD46P15529 392 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 NPY2RP49146 381 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TAS2R50P59544 299 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ABATP80404 500 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SRSF11Q05519 484 aaKnown RBP11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 EEF1A2Q05639 463 aaKnown RBP11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ZNF33BQ06732 778 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ACTN3Q08043 901 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 Q0VFX4 171 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 KIF5AQ12840 1032 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ARHGAP19Q14CB8 494 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TTLL9Q3SXZ7 439 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 RNF187Q5TA31 235 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SEL1L2Q5TEA6 688 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 THEMIS2Q5TEJ8 643 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ZNF324BQ6AW86 544 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 HIBCHQ6NVY1 386 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ADCK2Q7Z695 626 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CSNK1A1LQ8N752 337 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TMEM178AQ8NBL3 297 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ITLN2Q8WWU7 325 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CCDC120Q96HB5 630 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TGIF2Q9GZN2 237 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 DRC3Q9H069 523 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ZNF700Q9H0M5 742 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ETNK1Q9HBU6 452 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 BFARQ9NZS9 450 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 DRG1Q9Y295 367 aaKnown RBP11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 VPS9D1Q9Y2B5 631 aa11.67□□□□□ -0.54
HLA-DQB3-203ENST00000425319 PIKFYVEQ9Y2I7 2098 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 LOC105369274A0A096LPK9 316 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 LOC102723532A0A0G2JNH3 316 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 IQCF5A8MTL0 148 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 H0YGG7 62 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CDK2AP1O14519 115 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 PRICKLE3O43900 615 aaPredicted RBP11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SLC19A2O60779 497 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CTSVO60911 334 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CATP04040 527 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 COX6A1P12074 109 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 HRH2P25021 359 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 EEF1DP29692 281 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SOX11P35716 441 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 AGTR2P50052 363 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 EIF3BP55884 814 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ARF3P61204 181 aaPredicted RBP11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SARNPP82979 210 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ALDH6A1Q02252 535 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 RELAQ04206 551 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 FAM53BQ14153 422 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MEP1AQ16819 746 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ZNF766Q5HY98 468 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 FRMPD2BQ6IN97 320 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 FBXO42Q6P3S6 717 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 LRRC8BQ6P9F7 803 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 RNF44Q7L0R7 432 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 LAPTM4BQ86VI4 370 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 VRK3Q8IV63 474 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 OR4N4Q8N0Y3 316 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 KRT222Q8N1A0 295 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 OR13J1Q8NGT2 312 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 OR2A1Q8NGT9 310 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 OR9A1PQ8NGU1 263 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 MTFMTQ96DP5 389 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 LURAP1Q96LR2 239 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TCF12Q99081 682 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 UTP23Q9BRU9 249 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ACAT2Q9BWD1 397 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TSGA10Q9BZW7 698 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 KCNK13Q9HB14 408 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 RAB6BQ9NRW1 208 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 COQ3Q9NZJ6 369 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 PAK5Q9P286 719 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TCAF1Q9Y4C2 921 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 PCDHGB6Q9Y5F9 930 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 RELNP78509 3460 aa11.66□□□□□ -0.54
HLA-DQB3-203ENST00000425319 OR2A25A4D2G3 310 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SOWAHDA6NJG2 315 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 FAM227AF5H4B4 570 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 FANCGO15287 622 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ZBTB14O43829 449 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CLDN14O95500 239 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 F10P00742 488 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 APRTP07741 180 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 EZRP15311 586 aaKnown RBP11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ABOP16442 354 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 PAMP19021 973 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 POU3F2P20265 443 aaPredicted RBP11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 RPS3P23396 243 aaKnown RBP eCLIP11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SLC26A3P40879 764 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TDGF1P3P51864 188 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 ACVR1Q04771 509 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TBX2Q13207 712 aaPredicted RBP11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 EXT1Q16394 746 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 BTBD16Q32M84 506 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 CEP97Q8IW35 865 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TC2NQ8N9U0 490 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 SLC35B2Q8TB61 432 aa11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 THAP3Q8WTV1 239 aaPredicted RBP11.65□□□□□ -0.54
HLA-DQB3-203ENST00000425319 TAAR6Q96RI8 345 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms