RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SLC39A5Q6ZMH5 540 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 PHLPP2Q6ZVD8 1323 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 PAQR7Q86WK9 346 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 TMEM173Q86WV6 379 aaPredicted RBP3.57□□□□□ -1.84
SF3B1-205ENST00000424674 CDR2LQ86X02 465 aaPredicted RBP3.57□□□□□ -1.84
SF3B1-205ENST00000424674 ECHDC2Q86YB7 292 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 TDRPQ86YL5 185 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF595Q8IYB9 648 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 OFCC1Q8IZS5 231 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 PYROXD2Q8N2H3 581 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 SLC25A41Q8N5S1 370 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 RNF10Q8N5U6 811 aaKnown RBP3.57□□□□□ -1.84
SF3B1-205ENST00000424674 METTL25Q8N6Q8 603 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 MINDY2Q8NBR6 621 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 SPATA4Q8NEY3 305 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 OR9K2Q8NGE7 335 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 BBS10Q8TAM1 723 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 POC1BQ8TC44 478 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 C2CD4CQ8TF44 421 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 LIPHQ8WWY8 451 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 SOCS4Q8WXH5 440 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 FUBP1Q96AE4 644 aaKnown RBP3.57□□□□□ -1.84
SF3B1-205ENST00000424674 ULK4Q96C45 1275 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 DAZAP1Q96EP5 407 aaKnown RBP3.57□□□□□ -1.84
SF3B1-205ENST00000424674 C16orf58Q96GQ5 468 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 Q96MF0 132 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 RPRD1AQ96P16 312 aaPredicted RBP3.57□□□□□ -1.84
SF3B1-205ENST00000424674 ATG101Q9BSB4 218 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 NTMT1Q9BV86 223 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 FTHL17Q9BXU8 183 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 DNTTIP1Q9H147 329 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 SMOC2Q9H3U7 446 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 ACTR8Q9H981 624 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 CYP3A43Q9HB55 503 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 TRPC7Q9HCX4 862 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 CHMP1AQ9HD42 196 aaPredicted RBP3.57□□□□□ -1.84
SF3B1-205ENST00000424674 TREM1Q9NP99 234 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 CHRAC1Q9NRG0 131 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 SDHAF3Q9NRP4 125 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 ADARB2Q9NS39 739 aaKnown RBP3.57□□□□□ -1.84
SF3B1-205ENST00000424674 PIGVQ9NUD9 493 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 MTMR10Q9NXD2 777 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 WWOXQ9NZC7 414 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 CNOT2Q9NZN8 540 aaKnown RBP3.57□□□□□ -1.84
SF3B1-205ENST00000424674 KLHL9Q9P2J3 617 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 ARPP21Q9UBL0 812 aaPredicted RBP3.57□□□□□ -1.84
SF3B1-205ENST00000424674 WNT16Q9UBV4 365 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 KCNE5Q9UJ90 142 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 CRLS1Q9UJA2 301 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 KCNJ14Q9UNX9 436 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 GAB2Q9UQC2 676 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 MRPS33Q9Y291 106 aaKnown RBP3.57□□□□□ -1.84
SF3B1-205ENST00000424674 RNF215Q9Y6U7 377 aa3.57□□□□□ -1.84
SF3B1-205ENST00000424674 SBNO1A3KN83 1393 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 SPATA31A1Q5TZJ5 1347 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 SPATA31A5Q5VU36 1347 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 SPATA31A7Q8IWB4 1347 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ILVBLA1L0T0 632 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 HEATR9A2RTY3 570 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 OR6C75A6NL08 312 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 DUXAA6NLW8 204 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 KLRF2D3W0D1 207 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 H3BQ06 376 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF701M0R085 212 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 SLC28A1O00337 649 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 PTGESO14684 152 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 RRP8O43159 456 aaKnown RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 KCNAB3O43448 404 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 KLK8O60259 260 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 TSPAN1O60635 241 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 CDH16O75309 829 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ERN1O75460 977 aaKnown RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 JRKO75564 520 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 DFFBO76075 338 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ZFPL1O95159 310 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 GPANK1O95872 356 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 GAS8O95995 478 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 GH2P01242 217 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 KRT6AP02538 564 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 FESP07332 822 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 RAB40ALP0C0E4 278 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 PABPC4LP0CB38 370 aaKnown RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ZCCHC18P0CG32 403 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 FCER1AP12319 257 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF24P17028 368 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF37AP17032 561 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 MSR1P21757 451 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 LMO1P25800 156 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ADORA2AP29274 412 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 EPHB2P29323 1055 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 HLA-FP30511 346 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 HOXC9P31274 260 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 RPL9P32969 192 aaKnown RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ME1P48163 572 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 LEPRP48357 1165 aaKnown RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 PTH2RP49190 550 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ELLP55199 621 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 BASP1P80723 227 aaKnown RBP3.56□□□□□ -1.84
SF3B1-205ENST00000424674 CBX1P83916 185 aa3.56□□□□□ -1.84
SF3B1-205ENST00000424674 ADORA2A-AS1P86434 159 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms