RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 PYROXD1Q8WU10 500 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 ZFYVE21Q9BQ24 234 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 RAB17Q9H0T7 212 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 ACSS2Q9NR19 701 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 VWA7Q9Y334 891 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 PTRH2Q9Y3E5 179 aaKnown RBP20.97■□□□□ 0.95
TRAF4-204ENST00000422344 UTP20O75691 2785 aaKnown RBP20.97■□□□□ 0.95
TRAF4-204ENST00000422344 OR2A25A4D2G3 310 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 DSCR3O14972 297 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 SLC16A5O15375 505 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 HIST1H2AGP0C0S8 130 aaPredicted RBP20.96■□□□□ 0.95
TRAF4-204ENST00000422344 HIST1H2ADP20671 130 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 YBX1P67809 324 aaKnown RBP20.96■□□□□ 0.95
TRAF4-204ENST00000422344 TIAL1Q01085 375 aaKnown RBP eCLIP20.96■□□□□ 0.95
TRAF4-204ENST00000422344 LACTB2Q53H82 288 aaPredicted RBP20.96■□□□□ 0.95
TRAF4-204ENST00000422344 FRMPD2BQ6IN97 320 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 CAPN12Q6ZSI9 719 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 HIST1H2AHQ96KK5 128 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 CCDC138Q96M89 665 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 ZNF285Q96NJ3 590 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 HIST1H2AJQ99878 128 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 PLCD4Q9BRC7 762 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 H2AFJQ9BTM1 129 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 PARVBQ9HBI1 364 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 SAYSD1Q9NPB0 183 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 CCDC177Q9NQR7 707 aaPredicted RBP20.96■□□□□ 0.95
TRAF4-204ENST00000422344 NSMCE4AQ9NXX6 385 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 ADAMTS6Q9UKP5 1117 aa20.96■□□□□ 0.95
TRAF4-204ENST00000422344 NRP2O60462 931 aa20.95■□□□□ 0.94
TRAF4-204ENST00000422344 SAT1P21673 171 aa20.95■□□□□ 0.94
TRAF4-204ENST00000422344 FDXRP22570 491 aa20.95■□□□□ 0.94
TRAF4-204ENST00000422344 IMPA1P29218 277 aa20.95■□□□□ 0.94
TRAF4-204ENST00000422344 OTX2P32243 289 aa20.95■□□□□ 0.94
TRAF4-204ENST00000422344 STRA8Q7Z7C7 330 aa20.95■□□□□ 0.94
TRAF4-204ENST00000422344 SLC26A11Q86WA9 606 aa20.95■□□□□ 0.94
TRAF4-204ENST00000422344 ADAMTS17Q8TE56 1095 aa20.95■□□□□ 0.94
TRAF4-204ENST00000422344 C16orf45Q96MC5 204 aaPredicted RBP20.95■□□□□ 0.94
TRAF4-204ENST00000422344 TRIM54Q9BYV2 358 aa20.95■□□□□ 0.94
TRAF4-204ENST00000422344 TLK1Q9UKI8 766 aa20.95■□□□□ 0.94
TRAF4-204ENST00000422344 PDE10AQ9Y233 779 aa20.95■□□□□ 0.94
TRAF4-204ENST00000422344 TEX15Q9BXT5 2789 aa20.95■□□□□ 0.94
TRAF4-204ENST00000422344 LOC105369274A0A096LPK9 316 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 LOC102723532A0A0G2JNH3 316 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 HYKKA2RU49 373 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 FITM1A5D6W6 292 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 EIF3HO15372 352 aaKnown RBP eCLIP20.94■□□□□ 0.94
TRAF4-204ENST00000422344 KLF7O75840 302 aaPredicted RBP20.94■□□□□ 0.94
TRAF4-204ENST00000422344 DNAJB5O75953 348 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 GP1BBP13224 206 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 GCGRP47871 477 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 CHAF1BQ13112 559 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 CPZQ66K79 652 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 DUPD1Q68J44 220 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 PAQR7Q86WK9 346 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 OR4N4Q8N0Y3 316 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 CDKL2Q92772 493 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 RERGQ96A58 199 aaPredicted RBP20.94■□□□□ 0.94
TRAF4-204ENST00000422344 TRIM55Q9BYV6 548 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 PCBD2Q9H0N5 130 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 ING2Q9H160 280 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 ENAMQ9NRM1 1142 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 MOCS1Q9NZB8 636 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 STOX2Q9P2F5 926 aaPredicted RBP20.94■□□□□ 0.94
TRAF4-204ENST00000422344 TP53TG5Q9Y2B4 290 aa20.94■□□□□ 0.94
TRAF4-204ENST00000422344 USP9XQ93008 2570 aaPredicted RBP20.94■□□□□ 0.94
TRAF4-204ENST00000422344 SPTAN1Q13813 2472 aaKnown RBP20.93■□□□□ 0.94
TRAF4-204ENST00000422344 EZRP15311 586 aaKnown RBP20.93■□□□□ 0.94
TRAF4-204ENST00000422344 CCL11P51671 97 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 RRADP55042 308 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 TBPL1P62380 186 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 CAV1Q03135 178 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 CBLBQ13191 982 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 SSPNQ14714 243 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 PRAMEF13Q5VWM6 474 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 MRPL14Q6P1L8 145 aaKnown RBP20.93■□□□□ 0.94
TRAF4-204ENST00000422344 FBXO42Q6P3S6 717 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 LRRC56Q8IYG6 542 aaPredicted RBP20.93■□□□□ 0.94
TRAF4-204ENST00000422344 METTL27Q8N6F8 245 aaPredicted RBP20.93■□□□□ 0.94
TRAF4-204ENST00000422344 OR2Y1Q8NGV0 311 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 FKBP10Q96AY3 582 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 ALKBH8Q96BT7 664 aaKnown RBP20.93■□□□□ 0.94
TRAF4-204ENST00000422344 CABS1Q96KC9 395 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 IP6K3Q96PC2 410 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 OLFM1Q99784 485 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 GRHL1Q9NZI5 618 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 TXNDC16Q9P2K2 825 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 G3BP2Q9UN86 482 aaKnown RBP20.93■□□□□ 0.94
TRAF4-204ENST00000422344 PLAAQ9Y263 795 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 PSAT1Q9Y617 370 aa20.93■□□□□ 0.94
TRAF4-204ENST00000422344 IGKV1-8A0A0C4DH67 115 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 FAM95CA0A1B0GW59 222 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 CLEC18AA5D8T8 446 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 H0YGG7 62 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 PEX12O00623 359 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 PLTPP55058 493 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 ARF3P61204 181 aaPredicted RBP20.92■□□□□ 0.94
TRAF4-204ENST00000422344 ILF2Q12905 390 aaKnown RBP20.92■□□□□ 0.94
TRAF4-204ENST00000422344 ATP1A4Q13733 1029 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 MUM1Q2TAK8 710 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 ZNF425Q6IV72 752 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms