RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 STX2P32856 288 aa25.28■■□□□ 1.64
CDK9-202ENST00000421939 GP5P40197 560 aa25.28■■□□□ 1.64
CDK9-202ENST00000421939 ARSFP54793 590 aa25.28■■□□□ 1.64
CDK9-202ENST00000421939 POLE2P56282 527 aa25.28■■□□□ 1.64
CDK9-202ENST00000421939 AP1S2P56377 157 aa25.28■■□□□ 1.64
CDK9-202ENST00000421939 DCDP81605 110 aaKnown RBP25.28■■□□□ 1.64
CDK9-202ENST00000421939 IL10RAQ13651 578 aa25.28■■□□□ 1.64
CDK9-202ENST00000421939 UGT8Q16880 541 aa25.28■■□□□ 1.64
CDK9-202ENST00000421939 YOD1Q5VVQ6 348 aaPredicted RBP25.28■■□□□ 1.64
CDK9-202ENST00000421939 PRAMEF13Q5VWM6 474 aa25.28■■□□□ 1.64
CDK9-202ENST00000421939 AGTRAPQ6RW13 159 aa25.28■■□□□ 1.64
CDK9-202ENST00000421939 NKAPQ8N5F7 415 aaKnown RBP25.28■■□□□ 1.64
CDK9-202ENST00000421939 TTC29Q8NA56 475 aaPredicted RBP25.28■■□□□ 1.64
CDK9-202ENST00000421939 POPDC3Q9HBV1 291 aa25.28■■□□□ 1.64
CDK9-202ENST00000421939 STARD5Q9NSY2 213 aa25.28■■□□□ 1.64
CDK9-202ENST00000421939 SNX7Q9UNH6 387 aa25.28■■□□□ 1.64
CDK9-202ENST00000421939 C1QL1O75973 258 aa25.27■■□□□ 1.64
CDK9-202ENST00000421939 ENO2P09104 434 aaPredicted RBP25.27■■□□□ 1.64
CDK9-202ENST00000421939 SLC12A2P55011 1212 aa25.27■■□□□ 1.64
CDK9-202ENST00000421939 NFKB2Q00653 900 aa25.27■■□□□ 1.64
CDK9-202ENST00000421939 CEP97Q8IW35 865 aa25.27■■□□□ 1.64
CDK9-202ENST00000421939 CTAGE3PQ8IX95 158 aa25.27■■□□□ 1.64
CDK9-202ENST00000421939 RBBP8Q99708 897 aa25.27■■□□□ 1.64
CDK9-202ENST00000421939 TRIM54Q9BYV2 358 aa25.27■■□□□ 1.64
CDK9-202ENST00000421939 FAM129AQ9BZQ8 928 aa25.27■■□□□ 1.64
CDK9-202ENST00000421939 PCBD2Q9H0N5 130 aa25.27■■□□□ 1.64
CDK9-202ENST00000421939 ARL15Q9NXU5 204 aa25.27■■□□□ 1.64
CDK9-202ENST00000421939 DMGDHQ9UI17 866 aaKnown RBP25.27■■□□□ 1.64
CDK9-202ENST00000421939 TCFL5Q9UL49 500 aa25.27■■□□□ 1.64
CDK9-202ENST00000421939 PADI2Q9Y2J8 665 aa25.27■■□□□ 1.64
CDK9-202ENST00000421939 TLN1Q9Y490 2541 aaKnown RBP25.27■■□□□ 1.64
CDK9-202ENST00000421939 HEATR5BQ9P2D3 2071 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 LOC105369274A0A096LPK9 316 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 LOC102723532A0A0G2JNH3 316 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 A0A1B0GX78 115 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 FITM1A5D6W6 292 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 EZRP15311 586 aaKnown RBP25.26■■□□□ 1.63
CDK9-202ENST00000421939 POU4F1Q01851 419 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 KBTBD12Q3ZCT8 623 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 NKAIN1Q4KMZ8 207 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 WASHC2DQ5SRD0 308 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 SBSNQ6UWP8 590 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 TTLL10Q6ZVT0 673 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 ADCK2Q7Z695 626 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 OR4N4Q8N0Y3 316 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 APOBEC4Q8WW27 367 aaKnown RBP25.26■■□□□ 1.63
CDK9-202ENST00000421939 TSPAN17Q96FV3 270 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 GPR22Q99680 433 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 DHRS4Q9BTZ2 278 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 ATG10Q9H0Y0 220 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 CUTCQ9NTM9 273 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 CUEDC1Q9NWM3 386 aaPredicted RBP25.26■■□□□ 1.63
CDK9-202ENST00000421939 IFT80Q9P2H3 777 aaPredicted RBP25.26■■□□□ 1.63
CDK9-202ENST00000421939 IKZF3Q9UKT9 509 aa25.26■■□□□ 1.63
CDK9-202ENST00000421939 MTO1Q9Y2Z2 717 aaKnown RBP25.26■■□□□ 1.63
CDK9-202ENST00000421939 DSCR3O14972 297 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 ATXN8OSP0DMR3 200 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 ALAS2P22557 587 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 CCND1P24385 295 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 NAE1Q13564 534 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 FBXO42Q6P3S6 717 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 PPM1NQ8N819 430 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 FBF1Q8TES7 1133 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 ANKRD7Q92527 254 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 SGPP1Q9BX95 441 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 ADNPQ9H2P0 1102 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 GPAMQ9HCL2 828 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 GEMIN8Q9NWZ8 242 aaKnown RBP25.25■■□□□ 1.63
CDK9-202ENST00000421939 MTRF1LQ9UGC7 380 aaKnown RBP25.25■■□□□ 1.63
CDK9-202ENST00000421939 NDOR1Q9UHB4 597 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 GPN3Q9UHW5 284 aaPredicted RBP25.25■■□□□ 1.63
CDK9-202ENST00000421939 NOVA2Q9UNW9 492 aaKnown RBP25.25■■□□□ 1.63
CDK9-202ENST00000421939 MAN2B2Q9Y2E5 1009 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 ANKRD12Q6UB98 2062 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 COL6A6A6NMZ7 2263 aa25.25■■□□□ 1.63
CDK9-202ENST00000421939 NPEPPSL1A6NEC2 478 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 H0YGG7 62 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 EIF2S1P05198 315 aaKnown RBP25.24■■□□□ 1.63
CDK9-202ENST00000421939 SFTPCP11686 197 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 ARF3P61204 181 aaPredicted RBP25.24■■□□□ 1.63
CDK9-202ENST00000421939 RELAQ04206 551 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 NAB1Q13506 487 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 USP10Q14694 798 aaKnown RBP25.24■■□□□ 1.63
CDK9-202ENST00000421939 SLC9A5Q14940 896 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 PPP1R3AQ16821 1122 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 GLE1Q53GS7 698 aaKnown RBP25.24■■□□□ 1.63
CDK9-202ENST00000421939 FAM69BQ5VUD6 431 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 MLIPQ5VWP3 458 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 ZNF843Q8N446 348 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 ANKRD49Q8WVL7 239 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 ATL1Q8WXF7 558 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 THAP4Q8WY91 577 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 ALKBH8Q96BT7 664 aaKnown RBP25.24■■□□□ 1.63
CDK9-202ENST00000421939 FBXL8Q96CD0 374 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 CAB39LQ9H9S4 337 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 KCNMB2Q9Y691 235 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 SPTA1P02549 2419 aa25.24■■□□□ 1.63
CDK9-202ENST00000421939 HYKKA2RU49 373 aa25.23■■□□□ 1.63
CDK9-202ENST00000421939 CDC7O00311 574 aa25.23■■□□□ 1.63
CDK9-202ENST00000421939 HAT1O14929 419 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms