RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 GEMIN8Q9NWZ8 242 aaKnown RBP20.24■□□□□ 0.83
GPC1-202ENST00000420138 SPATA7Q9P0W8 599 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 POMPQ9Y244 141 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 EIF3LQ9Y262 564 aaKnown RBP20.24■□□□□ 0.83
GPC1-202ENST00000420138 DLGAP4Q9Y2H0 992 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 DYRK1BQ9Y463 629 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 OR52A4PA6NMU1 304 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 FXYD1O00168 92 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 TNFRSF10CO14798 259 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 EML2O95834 649 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 BCKDHAP12694 445 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 ANPEPP15144 967 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 CD6P30203 668 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 HSD17B2P37059 387 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 THOP1P52888 689 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 ZNF423Q2M1K9 1284 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 PRAMEF14Q5SWL7 426 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 PRAMEF13Q5VWM6 474 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 NXPE4Q6UWF7 544 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 Q6ZSR6 202 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 SLC22A18ASQ8N1D0 253 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 LIX1Q8N485 282 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 OR13H1Q8NG92 308 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 NRG4Q8WWG1 115 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 RLN3Q8WXF3 142 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 FCRL1Q96LA6 429 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 MTERF1Q99551 399 aaKnown RBP20.23■□□□□ 0.83
GPC1-202ENST00000420138 GPR174Q9BXC1 333 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 SPNS1Q9H2V7 528 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 CHRDQ9H2X0 955 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 CAAP1Q9H8G2 361 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 IMP3Q9NV31 184 aaKnown RBP20.23■□□□□ 0.83
GPC1-202ENST00000420138 TBC1D29Q9UFV1 150 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 PCDHGA11Q9Y5H2 935 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 IGHV1OR15-9A0A0B4J2B8 117 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 PRAMEF33A0A0G2JMD5 474 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 PRAMEF26H0Y7S4 382 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 NVLO15381 856 aaKnown RBP20.23■□□□□ 0.83
GPC1-202ENST00000420138 ETHE1O95571 254 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 AMD1P17707 334 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 HTR1BP28222 390 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 OXTRP30559 389 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 KCNK10P57789 538 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 CTBSQ01459 385 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 RPE65Q16518 533 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 ALG11Q2TAA5 492 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 CMPK2Q5EBM0 449 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 PAGE3Q5JUK9 113 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 LAYNQ6UX15 382 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 FAM160A2Q8N612 972 aaPredicted RBP20.23■□□□□ 0.83
GPC1-202ENST00000420138 CCL4L1Q8NHW4 92 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 CLDN23Q96B33 292 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 ROPN1LQ96C74 230 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 C11orf24Q96F05 449 aaPredicted RBP20.23■□□□□ 0.83
GPC1-202ENST00000420138 CAMK1GQ96NX5 476 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 TPSD1Q9BZJ3 242 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 SIT1Q9Y3P8 196 aa20.23■□□□□ 0.83
GPC1-202ENST00000420138 ANGPT2O15123 496 aa20.22■□□□□ 0.83
GPC1-202ENST00000420138 EEDO75530 441 aaKnown RBP20.22■□□□□ 0.83
GPC1-202ENST00000420138 AK4P27144 223 aaPredicted RBP20.22■□□□□ 0.83
GPC1-202ENST00000420138 CCNIQ14094 377 aa20.22■□□□□ 0.83
GPC1-202ENST00000420138 SLBPQ14493 270 aaKnown RBP eCLIP20.22■□□□□ 0.83
GPC1-202ENST00000420138 LAS2Q8IYD9 372 aa20.22■□□□□ 0.83
GPC1-202ENST00000420138 SPEM1Q8N4L4 309 aa20.22■□□□□ 0.83
GPC1-202ENST00000420138 HUS1BQ8NHY5 278 aa20.22■□□□□ 0.83
GPC1-202ENST00000420138 CCDC124Q96CT7 223 aaKnown RBP20.22■□□□□ 0.83
GPC1-202ENST00000420138 NAF1Q96HR8 494 aaKnown RBP20.22■□□□□ 0.83
GPC1-202ENST00000420138 SLC39A3Q9BRY0 314 aa20.22■□□□□ 0.83
GPC1-202ENST00000420138 EFCAB11Q9BUY7 163 aa20.22■□□□□ 0.83
GPC1-202ENST00000420138 TMEM168Q9H0V1 697 aa20.22■□□□□ 0.83
GPC1-202ENST00000420138 S100A14Q9HCY8 104 aa20.22■□□□□ 0.83
GPC1-202ENST00000420138 CROTQ9UKG9 612 aa20.22■□□□□ 0.83
GPC1-202ENST00000420138 SLCO1B1Q9Y6L6 691 aa20.22■□□□□ 0.83
GPC1-202ENST00000420138 PDZK1P1A8MUH7 402 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 MAGEB17A8MXT2 336 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 SRP54P61011 504 aaKnown RBP20.21■□□□□ 0.83
GPC1-202ENST00000420138 MUM1Q2TAK8 710 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 TIGD2Q4W5G0 525 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 MED27Q6P2C8 311 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 ABRAXAS1Q6UWZ7 409 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 RD3Q7Z3Z2 195 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 FAM129CQ86XR2 697 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 PCYOX1LQ8NBM8 494 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 DNAJC9Q8WXX5 260 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 BRF2Q9HAW0 419 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 GPR27Q9NS67 375 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 NMRK1Q9NWW6 199 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 DMTF1Q9Y222 760 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.21■□□□□ 0.83
GPC1-202ENST00000420138 VCANP13611 3396 aa20.21■□□□□ 0.83
GPC1-202ENST00000420138 PIPSLA2A3N6 862 aa20.2■□□□□ 0.82
GPC1-202ENST00000420138 CCDC154A6NI56 674 aa20.2■□□□□ 0.82
GPC1-202ENST00000420138 TOR1BO14657 336 aa20.2■□□□□ 0.82
GPC1-202ENST00000420138 CDH1P12830 882 aa20.2■□□□□ 0.82
GPC1-202ENST00000420138 HSD3B1P14060 373 aa20.2■□□□□ 0.82
GPC1-202ENST00000420138 ACPPP15309 386 aa20.2■□□□□ 0.82
GPC1-202ENST00000420138 TACR1P25103 407 aa20.2■□□□□ 0.82
GPC1-202ENST00000420138 HSD3B2P26439 372 aa20.2■□□□□ 0.82
GPC1-202ENST00000420138 RPS9P46781 194 aaKnown RBP20.2■□□□□ 0.82
GPC1-202ENST00000420138 ERFP50548 548 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms