RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 RAD1O60671 282 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 CPNE3O75131 537 aaKnown RBP22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 DLGAP3O95886 979 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 CCNYL3P0C7X3 344 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 NCF1P14598 390 aaPredicted RBP22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 NPPBP16860 134 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 HSD17B3P37058 310 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 MAGEA12P43365 314 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 CLN3Q13286 438 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 TCTE1Q5JU00 501 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 TLDC1Q6P9B6 456 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 ADCK2Q7Z695 626 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 CACNA2D3Q8IZS8 1091 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 CENPLQ8N0S6 344 aaPredicted RBP22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 IL22RA1Q8N6P7 574 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 CAVIN3Q969G5 261 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 PYCR2Q96C36 320 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 RHBDF1Q96CC6 855 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 RAB21Q9UL25 225 aa22.16■■□□□ 1.14
SMARCB1-205ENST00000417137 IGF2RP11717 2491 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 KERAO60938 352 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 ZNF28P17035 718 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 YBX1P67809 324 aaKnown RBP22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 IRF9Q00978 393 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 TSNAXIP1Q2TAA8 658 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 DEFB110Q30KQ9 67 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 PTCHD3Q3KNS1 767 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 ZNF425Q6IV72 752 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 PAQR7Q86WK9 346 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 SPACA3Q8IXA5 215 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 NKD1Q969G9 470 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 ZFYVE21Q9BQ24 234 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 SELENOSQ9BQE4 189 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 WWOXQ9NZC7 414 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 PADI1Q9ULC6 663 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 DYRK1BQ9Y463 629 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 KCNE2Q9Y6J6 123 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 ZZEF1O43149 2961 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 ATRXP46100 2492 aa22.15■■□□□ 1.14
SMARCB1-205ENST00000417137 IGKV1-8A0A0C4DH67 115 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 H7BY64 318 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 CTSVO60911 334 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 IPO13O94829 963 aaKnown RBP22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 TIAF1O95411 115 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 SHBGP04278 402 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 NTRK1P04629 796 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 KLK3P07288 261 aaPredicted RBP22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 RBP1P09455 135 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 EZRP15311 586 aaKnown RBP22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 GRK3P35626 688 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 GMPRP36959 345 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 TGIF1Q15583 401 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 ZXDCQ2QGD7 858 aaPredicted RBP22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 FBXO42Q6P3S6 717 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 RNF44Q7L0R7 432 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 THOC6Q86W42 341 aaKnown RBP22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 TDRPQ86YL5 185 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 GALNT6Q8NCL4 622 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 CLIP3Q96DZ5 547 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 PRAP1Q96NZ9 151 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 CAPS2Q9BXY5 557 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 SPRTNQ9H040 489 aaPredicted RBP22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 ACTR5Q9H9F9 607 aaPredicted RBP22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 NUDT4Q9NZJ9 180 aa22.14■■□□□ 1.13
SMARCB1-205ENST00000417137 A0A0J9YVX5 310 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 SUPT3HB4E1H0 165 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 ZSCAN9O15535 394 aaPredicted RBP22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 ZNF749O43361 778 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 HCRTR1O43613 425 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 SUPT3HO75486 399 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 GGT5P36269 586 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 GLRBP48167 497 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 KCNC1P48547 511 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 UCNP55089 124 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 ABHD18Q0P651 414 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 RASA2Q15283 850 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 MANEAQ5SRI9 462 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 TIPARPQ7Z3E1 657 aaKnown RBP22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 PDPRQ8NCN5 879 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 EXT2Q93063 718 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 KIAA1143Q96AT1 154 aaPredicted RBP22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 LRFN5Q96NI6 719 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 CCNL2Q96S94 520 aaPredicted RBP22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 ATOH8Q96SQ7 321 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 NDC1Q9BTX1 674 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 EFHD1Q9BUP0 239 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 CUEDC1Q9NWM3 386 aaPredicted RBP22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 TBK1Q9UHD2 729 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 PTBP2Q9UKA9 531 aaKnown RBP22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 SRPK3Q9UPE1 567 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 SLC22A14Q9Y267 594 aa22.13■■□□□ 1.13
SMARCB1-205ENST00000417137 CCR8P51685 355 aa22.12■■□□□ 1.13
SMARCB1-205ENST00000417137 ARSFP54793 590 aa22.12■■□□□ 1.13
SMARCB1-205ENST00000417137 VSX2P58304 361 aaPredicted RBP22.12■■□□□ 1.13
SMARCB1-205ENST00000417137 IFFO1Q0D2I5 559 aa22.12■■□□□ 1.13
SMARCB1-205ENST00000417137 GRM7Q14831 915 aa22.12■■□□□ 1.13
SMARCB1-205ENST00000417137 YOD1Q5VVQ6 348 aaPredicted RBP22.12■■□□□ 1.13
SMARCB1-205ENST00000417137 LCA5Q86VQ0 697 aa22.12■■□□□ 1.13
SMARCB1-205ENST00000417137 KLHDC8AQ8IYD2 350 aa22.12■■□□□ 1.13
SMARCB1-205ENST00000417137 TBC1D19Q8N5T2 526 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms