RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 TFR2Q9UP52 801 aa9.54□□□□□ -0.88
MDC1-202ENST00000416571 PCDHA13Q9Y5I0 950 aa9.54□□□□□ -0.88
MDC1-202ENST00000416571 CSMD2Q7Z408 3487 aa9.54□□□□□ -0.88
MDC1-202ENST00000416571 HIVEP1P15822 2718 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 RCCD1A6NED2 376 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 ERI2A8K979 691 aaKnown RBP9.53□□□□□ -0.88
MDC1-202ENST00000416571 IQCF5A8MTL0 148 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 E7EVH7 732 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 FAM227AF5H4B4 570 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 FFAR3O14843 346 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 KPNA5O15131 536 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 GPR42O15529 346 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 PRICKLE3O43900 615 aaPredicted RBP9.53□□□□□ -0.88
MDC1-202ENST00000416571 SLCO2B1O94956 709 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 CLDN14O95500 239 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 C1orf105O95561 183 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 CELA2AP08217 269 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 ITGAMP11215 1152 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 AGAP20933 346 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 PSMA3P25788 255 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 AOAHP28039 575 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 CCNFP41002 786 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 BDKRB1P46663 353 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 PMP22Q01453 160 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 ZNF766Q5HY98 468 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 TSTD2Q5T7W7 516 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 AADACL2Q6P093 401 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 NEK10Q6ZWH5 1172 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 OTOAQ7RTW8 1153 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 CEP97Q8IW35 865 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 LKAAEAR1Q8TD35 194 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 METTL21AQ8WXB1 218 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 MTFMTQ96DP5 389 aaKnown RBP9.53□□□□□ -0.88
MDC1-202ENST00000416571 CALR3Q96L12 384 aaKnown RBP9.53□□□□□ -0.88
MDC1-202ENST00000416571 C10orf90Q96M02 699 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 DPH7Q9BTV6 452 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 TUBB6Q9BUF5 446 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 ACAT2Q9BWD1 397 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 GPAMQ9HCL2 828 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 MKKSQ9NPJ1 570 aaPredicted RBP9.53□□□□□ -0.88
MDC1-202ENST00000416571 UTP6Q9NYH9 597 aaKnown RBP9.53□□□□□ -0.88
MDC1-202ENST00000416571 STMN3Q9NZ72 180 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 GNPTGQ9UJJ9 305 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 MKL2Q9ULH7 1088 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 KLK4Q9Y5K2 254 aa9.53□□□□□ -0.88
MDC1-202ENST00000416571 A0A1W2PQ72 361 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 OR2A25A4D2G3 310 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 A8MUI8 341 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 H0YGG7 62 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 PRMT5O14744 637 aaPredicted RBP9.52□□□□□ -0.89
MDC1-202ENST00000416571 TTI1O43156 1089 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 NRP2O60462 931 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 PHF2O75151 1096 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 IPO7O95373 1038 aaKnown RBP9.52□□□□□ -0.89
MDC1-202ENST00000416571 C8orf89P0DMQ9 161 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 CAPN3P20807 821 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 ADRA1DP25100 572 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 CYLC1P35663 651 aaPredicted RBP9.52□□□□□ -0.89
MDC1-202ENST00000416571 TTPAP49638 278 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 EMP3P54852 163 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 ARF3P61204 181 aaPredicted RBP9.52□□□□□ -0.89
MDC1-202ENST00000416571 ADORA2A-AS1P86434 159 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 TSTA3Q13630 321 aaPredicted RBP9.52□□□□□ -0.89
MDC1-202ENST00000416571 SEMA3AQ14563 771 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 C3AR1Q16581 482 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 MFSD4BQ5TF39 518 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 LDB1Q86U70 411 aaPredicted RBP9.52□□□□□ -0.89
MDC1-202ENST00000416571 CDH24Q86UP0 819 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 CSNK1A1LQ8N752 337 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 OR2A1Q8NGT9 310 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 HMGCLL1Q8TB92 370 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 RERGQ96A58 199 aaPredicted RBP9.52□□□□□ -0.89
MDC1-202ENST00000416571 TMEM121Q9BTD3 319 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 ZNF700Q9H0M5 742 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 MRPS30Q9NP92 439 aaKnown RBP9.52□□□□□ -0.89
MDC1-202ENST00000416571 CATSPERZQ9NTU4 200 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 SPATA7Q9P0W8 599 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 C19orf25Q9UFG5 118 aaPredicted RBP9.52□□□□□ -0.89
MDC1-202ENST00000416571 SLC2A6Q9UGQ3 507 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 TINAGQ9UJW2 476 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 RIMKLBQ9ULI2 386 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 RUVBL2Q9Y230 463 aaKnown RBP9.52□□□□□ -0.89
MDC1-202ENST00000416571 RUVBL1Q9Y265 456 aaKnown RBP9.52□□□□□ -0.89
MDC1-202ENST00000416571 NFS1Q9Y697 457 aa9.52□□□□□ -0.89
MDC1-202ENST00000416571 CCDC168Q8NDH2 2452 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 LOC102723996A0A087X1L8 192 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 TXNDC9O14530 226 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 PKMP14618 531 aaKnown RBP9.51□□□□□ -0.89
MDC1-202ENST00000416571 ABOP16442 354 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 EEF1DP29692 281 aaKnown RBP9.51□□□□□ -0.89
MDC1-202ENST00000416571 RPA3P35244 121 aaPredicted RBP9.51□□□□□ -0.89
MDC1-202ENST00000416571 AVPR1BP47901 424 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 GDF10P55107 478 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 ALDH6A1Q02252 535 aaKnown RBP9.51□□□□□ -0.89
MDC1-202ENST00000416571 PCOLCEQ15113 449 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 HKDC1Q2TB90 917 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 PRTGQ2VWP7 1150 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 BTBD16Q32M84 506 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 CCSMST1Q4G0I0 132 aa9.51□□□□□ -0.89
MDC1-202ENST00000416571 KRTCAP3Q53RY4 240 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms