RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 B3GNT3Q9Y2A9 372 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 MED16Q9Y2X0 877 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 HS3ST3B1Q9Y662 390 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 NUP210LQ5VU65 1888 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 MDC1Q14676 2089 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 CNTRLQ7Z7A1 2325 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 E7ENX8 843 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 GFYI3L273 518 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 CES2O00748 559 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 NRP2O60462 931 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 MED26O95402 600 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 SLC16A8O95907 504 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 TAP2Q03519 686 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 RELAQ04206 551 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 CUL1Q13616 776 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 PPP1R7Q15435 360 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 TUBB8Q3ZCM7 444 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 IRAK1BP1Q5VVH5 260 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 ICE2Q659A1 982 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 KIRREL2Q6UWL6 708 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 CYHR1Q6ZMK1 362 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 AGGF1Q8N302 714 aaeCLIP16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 GIMAP7Q8NHV1 300 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 GABPB2Q8TAK5 448 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 STT3BQ8TCJ2 826 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 ZNF480Q8WV37 535 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 MIEF2Q96C03 454 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 GPR21Q99679 349 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 FAM167BQ9BTA0 163 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 MAP10Q9P2G4 905 aa16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 ZNF282Q9UDV7 671 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-208ENST00000416159 FLNCQ14315 2725 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 EIF3FO00303 357 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 TXNDC9O14530 226 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 PRPF4O43172 522 aaKnown RBP eCLIP16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 HAUS5O94927 633 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 SYF2O95926 243 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 F7P08709 466 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 ZGLP1P0C6A0 271 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 GP1BBP13224 206 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 PTK6Q13882 451 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 PRR30Q53SZ7 412 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 HSP90AA5PQ58FG0 334 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 RNASEH2BQ5TBB1 312 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 ZNF425Q6IV72 752 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 UGT3A1Q6NUS8 523 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 SHISA6Q6ZSJ9 500 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 KCNMB4Q86W47 210 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 DTWD1Q8N5C7 304 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 CD200R1Q8TD46 325 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 MVB12AQ96EY5 273 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 CABS1Q96KC9 395 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 C10orf90Q96M02 699 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 AARSD1Q9BTE6 412 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 CRB3Q9BUF7 120 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 IARS2Q9NSE4 1012 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 LRRK2Q5S007 2527 aa16.77■□□□□ 0.28
PDLIM2-208ENST00000416159 IGLV3-12A0A075B6K2 115 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 IGKV1-8A0A0C4DH67 115 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 BLACEA4D250 179 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 SMAPO00193 183 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 AGFG2O95081 481 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 EZRP15311 586 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 PGAM1P18669 254 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 FBLP22087 321 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 SKIV2L2P42285 1042 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 MPP1Q00013 466 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 KLC1Q07866 573 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 AGAP7PQ5VUJ5 663 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 GARNL3Q5VVW2 1013 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 LRRC8EQ6NSJ5 796 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 Q6ZS92 163 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 PCGF5Q86SE9 256 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 PARP9Q8IXQ6 854 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 LRRC56Q8IYG6 542 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 CSNK1A1LQ8N752 337 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 PPFIBP2Q8ND30 876 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 OR11G2Q8NGC1 345 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 RERGQ96A58 199 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 SNRNP40Q96DI7 357 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 AGAP4Q96P64 663 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 PSMG3-AS1Q96PY0 264 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 OR2A5Q96R48 311 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 EBNA1BP2Q99848 306 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 ILKAPQ9H0C8 392 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 LRRC4CQ9HCJ2 640 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 STOX2Q9P2F5 926 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 SNX12Q9UMY4 172 aa16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 RUVBL1Q9Y265 456 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-208ENST00000416159 TCP11X1B4DZS4 312 aa16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 DNALI1O14645 258 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 TTC4O95801 387 aa16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 THEMIS2Q5TEJ8 643 aa16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 UBE2R2Q712K3 238 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 CPNE9Q8IYJ1 553 aa16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 CISD2Q8N5K1 135 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 C2CD4AQ8NCU7 369 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 MCOLN3Q8TDD5 553 aa16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 LHPPQ9H008 270 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms