RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 SPAM1P38567 509 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 NSG1P42857 185 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 HNMTP50135 292 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 BCL2L1Q07817 233 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 ARHGEF7Q14155 803 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 DUOXA1Q1HG43 343 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 SOWAHCQ53LP3 525 aaPredicted RBP9.51□□□□□ -0.89
CD44-206ENST00000415148 SLC8B1Q6J4K2 584 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 DOK6Q6PKX4 331 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 NXPE1Q8N323 547 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 TTC29Q8NA56 475 aaPredicted RBP9.51□□□□□ -0.89
CD44-206ENST00000415148 DCAF4L2Q8NA75 395 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 PSMA8Q8TAA3 256 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 CSGALNACT1Q8TDX6 532 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 FCRL1Q96LA6 429 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 INPP5KQ9BT40 448 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 SPATA9Q9BWV2 254 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 ABCG8Q9H221 673 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 RIBC2Q9H4K1 309 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 RNF167Q9H6Y7 350 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 ACOT13Q9NPJ3 140 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 THG1LQ9NWX6 298 aaKnown RBP9.51□□□□□ -0.89
CD44-206ENST00000415148 DLGAP4Q9Y2H0 992 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 KCNE1BA0A087WTH5 132 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 CA12O43570 354 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 TBL1XO60907 577 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 C8GP07360 202 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 HMGA1P17096 107 aaKnown RBP9.51□□□□□ -0.89
CD44-206ENST00000415148 BPIP17213 487 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 SDC1P18827 310 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 TCEA1P23193 301 aaKnown RBP9.51□□□□□ -0.89
CD44-206ENST00000415148 KDELR2P33947 212 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 TGFBR2P37173 567 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 CDKN2CP42773 168 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 SEPHS1P49903 392 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 TUBA1BP68363 451 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 IFITM2Q01629 132 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 VEZF1Q14119 521 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 MAD2L1BPQ15013 274 aaPredicted RBP9.51□□□□□ -0.89
CD44-206ENST00000415148 CPSF6Q16630 551 aaKnown RBP eCLIP9.51□□□□□ -0.89
CD44-206ENST00000415148 VMACQ2NL98 169 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 PROX2Q3B8N5 592 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 ATXN7L2Q5T6C5 722 aaPredicted RBP9.51□□□□□ -0.89
CD44-206ENST00000415148 KIAA1614Q5VZ46 1190 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 TUBA1AQ71U36 451 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 EIF3MQ7L2H7 374 aaKnown RBP9.51□□□□□ -0.89
CD44-206ENST00000415148 ADCK1Q86TW2 530 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 METTL3Q86U44 580 aaKnown RBP9.51□□□□□ -0.89
CD44-206ENST00000415148 LACC1Q8IV20 430 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 CLIP4Q8N3C7 705 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 ZNF540Q8NDQ6 660 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 FCGR1BQ92637 280 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 NELL1Q92832 810 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 MTFMTQ96DP5 389 aaKnown RBP9.51□□□□□ -0.89
CD44-206ENST00000415148 ALG14Q96F25 216 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 PITX2Q99697 317 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 SLC12A9Q9BXP2 914 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 RNF38Q9H0F5 515 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 ELOVL6Q9H5J4 265 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 ABCB10Q9NRK6 738 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 ANKMY1Q9P2S6 941 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 PPT2Q9UMR5 302 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 GABRQQ9UN88 632 aa9.51□□□□□ -0.89
CD44-206ENST00000415148 FCF1Q9Y324 198 aaKnown RBP9.51□□□□□ -0.89
CD44-206ENST00000415148 CAB39Q9Y376 341 aaPredicted RBP9.51□□□□□ -0.89
CD44-206ENST00000415148 CLIC1O00299 241 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 SLC16A5O15375 505 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 KCNK5O95279 499 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 ZNF682O95780 498 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 GALTP07902 379 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 AMD1P17707 334 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 HNF1BP35680 557 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 UGT2B10P36537 528 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 KIR3DL1P43629 444 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 FLT3LGP49771 235 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 NEK2P51955 445 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 ACLYP53396 1101 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 C21orf58P58505 322 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 CHRNA6Q15825 494 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 CCDC92Q53HC0 331 aaPredicted RBP9.5□□□□□ -0.89
CD44-206ENST00000415148 COLEC12Q5KU26 742 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 RETSATQ6NUM9 610 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 NEK5Q6P3R8 708 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 TUBA3EQ6PEY2 450 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 Q6ZPB1 254 aaPredicted RBP9.5□□□□□ -0.89
CD44-206ENST00000415148 CBLL1Q75N03 491 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 RNF180Q86T96 592 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 HORMAD1Q86X24 394 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 SCAIQ8N9R8 606 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 HJURPQ8NCD3 748 aaPredicted RBP9.5□□□□□ -0.89
CD44-206ENST00000415148 LGALS12Q96DT0 336 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 TRMT2BQ96GJ1 504 aaKnown RBP9.5□□□□□ -0.89
CD44-206ENST00000415148 METTL2AQ96IZ6 378 aaKnown RBP9.5□□□□□ -0.89
CD44-206ENST00000415148 LYSMD1Q96S90 227 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 CEP44Q9C0F1 390 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 ZBTB20Q9HC78 741 aaPredicted RBP9.5□□□□□ -0.89
CD44-206ENST00000415148 RASSF1Q9NS23 344 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 SIRT5Q9NXA8 310 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 ARL15Q9NXU5 204 aa9.5□□□□□ -0.89
CD44-206ENST00000415148 ZDHHC3Q9NYG2 299 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms