RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 EIF2S1P05198 315 aaKnown RBP14.17□□□□□ -0.14
LIMS4-201ENST00000413601 ITGAXP20702 1163 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 TAS2R39P59534 338 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 ZNF460Q14592 562 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 WHAMMP3Q1A5X7 153 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 ZNF425Q6IV72 752 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 C8orf74Q6P047 294 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 AGTRAPQ6RW13 159 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 TMEM207Q6UWW9 146 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 C3orf62Q6ZUJ4 267 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 ZNF605Q86T29 641 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 DTWD1Q8N5C7 304 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 THAP4Q8WY91 577 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 ALKBH8Q96BT7 664 aaKnown RBP14.17□□□□□ -0.14
LIMS4-201ENST00000413601 ABHD17AQ96GS6 310 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 VPS39Q96JC1 886 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 C17orf62Q9BQA9 187 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 MCMBPQ9BTE3 642 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 DHRS4Q9BTZ2 278 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 ATG10Q9H0Y0 220 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 SYNPO2LQ9H987 977 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 CCDC177Q9NQR7 707 aaPredicted RBP14.17□□□□□ -0.14
LIMS4-201ENST00000413601 ENAMQ9NRM1 1142 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 SLC22A11Q9NSA0 550 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 CUEDC1Q9NWM3 386 aaPredicted RBP14.17□□□□□ -0.14
LIMS4-201ENST00000413601 NSMCE4AQ9NXX6 385 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 ANKMY1Q9P2S6 941 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 TUBD1Q9UJT1 453 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 PADI2Q9Y2J8 665 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 SCN3AQ9NY46 2000 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 KALRNO60229 2985 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 TCRBV9S1A1TA0A576 114 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 HYKKA2RU49 373 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 FITM1A5D6W6 292 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 H0YGG7 62 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 H7BY64 318 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 CNOT3O75175 753 aaKnown RBP14.16□□□□□ -0.14
LIMS4-201ENST00000413601 DNAJB5O75953 348 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 MED26O95402 600 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 HIST1H2AGP0C0S8 130 aaPredicted RBP14.16□□□□□ -0.14
LIMS4-201ENST00000413601 ZNF37AP17032 561 aaPredicted RBP14.16□□□□□ -0.14
LIMS4-201ENST00000413601 HIST1H2ADP20671 130 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 MAGEA4P43358 317 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 PMS2P54278 862 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 FOXL2P58012 376 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 GPX6P59796 221 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 ARF3P61204 181 aaPredicted RBP14.16□□□□□ -0.14
LIMS4-201ENST00000413601 TBPL1P62380 186 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 ABATP80404 500 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 CHAF1BQ13112 559 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 FAM214AQ32MH5 1076 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 YOD1Q5VVQ6 348 aaPredicted RBP14.16□□□□□ -0.14
LIMS4-201ENST00000413601 CPZQ66K79 652 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 ADCK2Q7Z695 626 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 CEP97Q8IW35 865 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 TMEM151BQ8IW70 566 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 METTL27Q8N6F8 245 aaPredicted RBP14.16□□□□□ -0.14
LIMS4-201ENST00000413601 C9orf43Q8TAL5 461 aaPredicted RBP14.16□□□□□ -0.14
LIMS4-201ENST00000413601 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.16□□□□□ -0.14
LIMS4-201ENST00000413601 PDLIM5Q96HC4 596 aaKnown RBP14.16□□□□□ -0.14
LIMS4-201ENST00000413601 HIST1H2AHQ96KK5 128 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 PRAP1Q96NZ9 151 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 HIST1H2AJQ99878 128 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 H2AFJQ9BTM1 129 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 TRIM55Q9BYV6 548 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 RHOJQ9H4E5 214 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 ZNF71Q9NQZ8 489 aaPredicted RBP14.16□□□□□ -0.14
LIMS4-201ENST00000413601 ARL15Q9NXU5 204 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 UTP6Q9NYH9 597 aaKnown RBP14.16□□□□□ -0.14
LIMS4-201ENST00000413601 IKZF3Q9UKT9 509 aa14.16□□□□□ -0.14
LIMS4-201ENST00000413601 PTRH2Q9Y3E5 179 aaKnown RBP14.16□□□□□ -0.14
LIMS4-201ENST00000413601 ARGFXA6NJG6 315 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 HAT1O14929 419 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 RFPL1O75677 317 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 EZRP15311 586 aaKnown RBP14.15□□□□□ -0.14
LIMS4-201ENST00000413601 OTX2P32243 289 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 FOLR3P41439 243 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 OR1D4P47884 311 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 NAE1Q13564 534 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 ZXDCQ2QGD7 858 aaPredicted RBP14.15□□□□□ -0.14
LIMS4-201ENST00000413601 PRAMEF13Q5VWM6 474 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 MRPL14Q6P1L8 145 aaKnown RBP14.15□□□□□ -0.14
LIMS4-201ENST00000413601 CYS1Q717R9 158 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 PTRH1Q86Y79 214 aaKnown RBP14.15□□□□□ -0.14
LIMS4-201ENST00000413601 PLD3Q8IV08 490 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 APLFQ8IW19 511 aaPredicted RBP14.15□□□□□ -0.14
LIMS4-201ENST00000413601 CDKL2Q92772 493 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 OR2A5Q96R48 311 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 TRIM54Q9BYV2 358 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 PHACTR1Q9C0D0 580 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 TLK1Q9UKI8 766 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 SH2B3Q9UQQ2 575 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 MTO1Q9Y2Z2 717 aaKnown RBP14.15□□□□□ -0.14
LIMS4-201ENST00000413601 MAU2Q9Y6X3 613 aa14.15□□□□□ -0.14
LIMS4-201ENST00000413601 PABPN1LA6NDY0 278 aaKnown RBP14.14□□□□□ -0.15
LIMS4-201ENST00000413601 FAM159BA6NKW6 160 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 CDC7O00311 574 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 GUCA1CO95843 209 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 C1QAP02745 245 aa14.14□□□□□ -0.15
LIMS4-201ENST00000413601 CD63P08962 238 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms