RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 REXO2Q9Y3B8 237 aaKnown RBP11.56□□□□□ -0.56
LIMS2-210ENST00000413578 TCAF1Q9Y4C2 921 aa11.56□□□□□ -0.56
LIMS2-210ENST00000413578 TACC2O95359 2948 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 GOLGA6L9A6NEM1 432 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 H0YGG7 62 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 CCL21O00585 134 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 FFAR3O14843 346 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 GPR42O15529 346 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 FOXS1O43638 330 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 RASAL1O95294 804 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 F10P00742 488 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 CRYABP02511 175 aaKnown RBP11.55□□□□□ -0.56
LIMS2-210ENST00000413578 RPS3P23396 243 aaKnown RBP eCLIP11.55□□□□□ -0.56
LIMS2-210ENST00000413578 CYLC1P35663 651 aaPredicted RBP11.55□□□□□ -0.56
LIMS2-210ENST00000413578 PPARGP37231 505 aaPredicted RBP11.55□□□□□ -0.56
LIMS2-210ENST00000413578 ARF3P61204 181 aaPredicted RBP11.55□□□□□ -0.56
LIMS2-210ENST00000413578 SRSF11Q05519 484 aaKnown RBP11.55□□□□□ -0.56
LIMS2-210ENST00000413578 FASTKQ14296 549 aaKnown RBP11.55□□□□□ -0.56
LIMS2-210ENST00000413578 TMED2Q15363 201 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 TESK1Q15569 626 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 AARS2Q5JTZ9 985 aaKnown RBP11.55□□□□□ -0.56
LIMS2-210ENST00000413578 MTFR2Q6P444 385 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 PAQR7Q86WK9 346 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 ZC3H7AQ8IWR0 971 aaKnown RBP11.55□□□□□ -0.56
LIMS2-210ENST00000413578 OR6P1Q8NGX9 317 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 PLCD4Q9BRC7 762 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 DPH7Q9BTV6 452 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 TRPC4Q9UBN4 977 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 SEC14L3Q9UDX4 400 aa11.55□□□□□ -0.56
LIMS2-210ENST00000413578 TTC7AQ9ULT0 858 aaPredicted RBP11.55□□□□□ -0.56
LIMS2-210ENST00000413578 RUVBL1Q9Y265 456 aaKnown RBP11.55□□□□□ -0.56
LIMS2-210ENST00000413578 A0A0U1RQJ8 604 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 OR5H15A6NDH6 313 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 PRAMEF2O60811 474 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 PHF2O75151 1096 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 KRT38O76015 456 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 MATN4O95460 622 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 EIF2S1P05198 315 aaKnown RBP11.54□□□□□ -0.56
LIMS2-210ENST00000413578 AGAP20933 346 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 CXCR2P25025 360 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 FDFT1P37268 417 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 CCNFP41002 786 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 TTPAP49638 278 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 SNRPNP63162 240 aaKnown RBP11.54□□□□□ -0.56
LIMS2-210ENST00000413578 PRAMEP78395 509 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 NAA25Q14CX7 972 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 CDSNQ15517 529 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 OASLQ15646 514 aaKnown RBP11.54□□□□□ -0.56
LIMS2-210ENST00000413578 HKDC1Q2TB90 917 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.54□□□□□ -0.56
LIMS2-210ENST00000413578 CTSL3PQ5NE16 218 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 GARNL3Q5VVW2 1013 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 ZNF425Q6IV72 752 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 TTC23LQ6PF05 361 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 ACBD4Q8NC06 268 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 MRFAP1L1Q96HT8 127 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 CABS1Q96KC9 395 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 BIRC8Q96P09 236 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 PANX3Q96QZ0 392 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 OR2A5Q96R48 311 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.54□□□□□ -0.56
LIMS2-210ENST00000413578 MKKSQ9NPJ1 570 aaPredicted RBP11.54□□□□□ -0.56
LIMS2-210ENST00000413578 TREX1Q9NSU2 369 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 CATSPERZQ9NTU4 200 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 GNPTGQ9UJJ9 305 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 CDC14AQ9UNH5 594 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 ZNF835Q9Y2P0 537 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 MRFAP1Q9Y605 127 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 EPN1Q9Y6I3 576 aaPredicted RBP11.54□□□□□ -0.56
LIMS2-210ENST00000413578 NF1P21359 2839 aa11.54□□□□□ -0.56
LIMS2-210ENST00000413578 SOWAHDA6NJG2 315 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 C19orf84I3L1E1 186 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 KPNA5O15131 536 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 PRPF4O43172 522 aaKnown RBP eCLIP11.53□□□□□ -0.56
LIMS2-210ENST00000413578 SLC19A2O60779 497 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 WFS1O76024 890 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 GAS8O95995 478 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 HEXBP07686 556 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 ICAM2P13598 275 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 COX6B1P14854 86 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 ARNTP27540 789 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 ATP5DP30049 168 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 CMPK1P30085 196 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 STIP1P31948 543 aaKnown RBP11.53□□□□□ -0.56
LIMS2-210ENST00000413578 AP2B1P63010 937 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 PMP22Q01453 160 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 RELAQ04206 551 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 C3AR1Q16581 482 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 PTRHD1Q6GMV3 140 aaKnown RBP11.53□□□□□ -0.56
LIMS2-210ENST00000413578 XKRXQ6PP77 449 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 PPP1R21Q6ZMI0 780 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 Q6ZPB1 254 aaPredicted RBP11.53□□□□□ -0.56
LIMS2-210ENST00000413578 LRRC6Q86X45 466 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 MPP5Q8N3R9 675 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 RAB42Q8N4Z0 105 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 CSNK1A1LQ8N752 337 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 ADAMTS18Q8TE60 1221 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 ATG4AQ8WYN0 398 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 TUBB6Q9BUF5 446 aa11.53□□□□□ -0.56
LIMS2-210ENST00000413578 CHRAC1Q9NRG0 131 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms