RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 Q6ZSR9 355 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 TRIM46Q7Z4K8 759 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 BMP8AQ7Z5Y6 402 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 SLC9B2Q86UD5 537 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 AMIGO1Q86WK6 493 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 C17orf64Q86WR6 236 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 GKN2Q86XP6 184 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 FAM129CQ86XR2 697 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 RBM12BQ8IXT5 1001 aaKnown RBP6.41□□□□□ -1.38
VPS41-204ENST00000413141 FAM46DQ8NEK8 389 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 ABHD11Q8NFV4 315 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 LMX1AQ8TE12 382 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 ZDHHC1Q8WTX9 485 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 ZFPM2Q8WW38 1151 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 SELENOMQ8WWX9 145 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 LCN9Q8WX39 176 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 SH3KBP1Q96B97 665 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 REPS1Q96D71 796 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 ZC3H10Q96K80 434 aaKnown RBP6.41□□□□□ -1.38
VPS41-204ENST00000413141 C1orf50Q9BV19 199 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 ACAT2Q9BWD1 397 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 SPNS1Q9H2V7 528 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 SRMSQ9H3Y6 488 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 ERVMER34-1Q9H9K5 563 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 TXLNGQ9NUQ3 528 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 TMEM74BQ9NUR3 256 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 MRGBPQ9NV56 204 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 ARL8BQ9NVJ2 186 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 CUEDC1Q9NWM3 386 aaPredicted RBP6.41□□□□□ -1.38
VPS41-204ENST00000413141 GEMIN8Q9NWZ8 242 aaKnown RBP6.41□□□□□ -1.38
VPS41-204ENST00000413141 SPHK1Q9NYA1 384 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 OR6C2Q9NZP2 312 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 CPNE7Q9UBL6 633 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 PILRBQ9UKJ0 227 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 G3BP2Q9UN86 482 aaKnown RBP6.41□□□□□ -1.38
VPS41-204ENST00000413141 BOLA1Q9Y3E2 137 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 PCDHB11Q9Y5F2 797 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 SNX11Q9Y5W9 270 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 CACNA1IQ9P0X4 2223 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 THADAQ6YHU6 1953 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 ABCA7Q8IZY2 2146 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 SPAG17Q6Q759 2223 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 IGKV1-8A0A0C4DH67 115 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 NPIPB8E9PQR5 432 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 LMO7DNF2Z398 122 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 BTN3A3O00478 584 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 YY2O15391 372 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 NOBOXO60393 691 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 CCNDBP1O95273 360 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 SP9P0CG40 484 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 T-ENOLP0DO92 83 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 PCNAP12004 261 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 HSD3B1P14060 373 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 IDO1P14902 403 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 CALB2P22676 271 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 HSD3B2P26439 372 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 PIK3R1P27986 724 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 PRDX6P30041 224 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 ADSLP30566 484 aaPredicted RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 CNR2P34972 360 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 HOXD12P35452 270 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 SCTRP47872 440 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 FASLGP48023 281 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 MRPL19P49406 292 aaKnown RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 CCR8P51685 355 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 HNRNPH2P55795 449 aaKnown RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 MAZP56270 477 aaKnown RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 STX1BP61266 288 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 NCALDP61601 193 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 RPL38P63173 70 aaKnown RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 IRX1P78414 480 aaPredicted RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 ABATP80404 500 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 MEF2AQ02078 507 aaPredicted RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 HHEXQ03014 270 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 PRDX1Q06830 199 aaKnown RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 KLF10Q13118 480 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 LAPTM5Q13571 262 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 DDX39BQ13838 428 aaKnown RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 KIR2DS3Q14952 304 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 NAA25Q14CX7 972 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 HERC3Q15034 1050 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 ANGPT1Q15389 498 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 GSTA3Q16772 222 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 HIST2H2ACQ16777 129 aaPredicted RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 IMPG1Q17R60 797 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 KIF19Q2TAC6 998 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 SMU1Q2TAY7 513 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 DEFB133Q30KQ1 61 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 C6orf136Q5SQH8 315 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 C10orf62Q5T681 223 aaPredicted RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 HIST2H2AA3Q6FI13 130 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 MED27Q6P2C8 311 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 CEP68Q76N32 757 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 SPATA19Q7Z5L4 167 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 C17orf82Q86X59 251 aaPredicted RBP6.4□□□□□ -1.38
VPS41-204ENST00000413141 ZFAND4Q86XD8 727 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 SYT12Q8IV01 421 aa6.4□□□□□ -1.38
VPS41-204ENST00000413141 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.4□□□□□ -1.38
VPS41-204ENST00000413141 LAS2Q8IYD9 372 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms