RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 PTPN5P54829 565 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 FOXL2P58012 376 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 ID2Q02363 134 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 BNIP1Q12981 228 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 PDZD3Q86UT5 571 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 PACS2Q86VP3 889 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 C17orf64Q86WR6 236 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 NCSTNQ92542 709 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 RSC1A1Q92681 617 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 CCDC138Q96M89 665 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 TMEM121BQ9BXQ6 578 aaPredicted RBP9.38□□□□□ -0.91
SMPD4-203ENST00000412570 TM9SF3Q9HD45 589 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 TXLNGQ9NUQ3 528 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 HRASLS2Q9NWW9 162 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 A0A1W2PPC4 97 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 SH3BP5O60239 455 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 H2AFYO75367 372 aaKnown RBP9.38□□□□□ -0.91
SMPD4-203ENST00000412570 CDC123O75794 336 aaPredicted RBP9.38□□□□□ -0.91
SMPD4-203ENST00000412570 TNFP01375 233 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 KRT6AP02538 564 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 KRT6BP04259 564 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 CTSBP07858 339 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 SLC26A3P40879 764 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 KRT6CP48668 564 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 CLDN6P56747 220 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 CBLBQ13191 982 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 FZD2Q14332 565 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 SLC9A5Q14940 896 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 UGT3A2Q3SY77 523 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 GTDC1Q4AE62 458 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 PRAMEF17Q5VTA0 474 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 UCN3Q969E3 161 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 SPACA7Q96KW9 195 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 C17orf62Q9BQA9 187 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 PCDHAC1Q9H158 963 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 TAGLN3Q9UI15 199 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 FZD4Q9ULV1 537 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 RP1L1Q8IWN7 2480 aaPredicted RBP9.38□□□□□ -0.91
SMPD4-203ENST00000412570 GFYI3L273 518 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 ANGPT2O15123 496 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 AP1G1O43747 822 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 TGDSO95455 350 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 MATN4O95460 622 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 KLK1P06870 262 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 C8orf89P0DMQ9 161 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 ST13P50502 369 aaKnown RBP9.38□□□□□ -0.91
SMPD4-203ENST00000412570 EIF2B5Q13144 721 aaKnown RBP9.38□□□□□ -0.91
SMPD4-203ENST00000412570 UAP1L1Q3KQV9 507 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 FAM174BQ3ZCQ3 159 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 PDPRQ8NCN5 879 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 FBXO30Q8TB52 745 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 SLC7A6OSQ96CW6 309 aaPredicted RBP9.38□□□□□ -0.91
SMPD4-203ENST00000412570 ZNF514Q96K75 400 aaPredicted RBP9.38□□□□□ -0.91
SMPD4-203ENST00000412570 CADM1Q9BY67 442 aaKnown RBP9.38□□□□□ -0.91
SMPD4-203ENST00000412570 LRTM1Q9HBL6 345 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 SLC40A1Q9NP59 571 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 L3MBTL1Q9Y468 752 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 PCM1Q15154 2024 aa9.38□□□□□ -0.91
SMPD4-203ENST00000412570 LCMT2O60294 686 aaKnown RBP9.37□□□□□ -0.91
SMPD4-203ENST00000412570 PSIP1O75475 530 aaKnown RBP9.37□□□□□ -0.91
SMPD4-203ENST00000412570 RNF144AP50876 292 aaPredicted RBP9.37□□□□□ -0.91
SMPD4-203ENST00000412570 PRKCQQ04759 706 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 ACSM2AQ08AH3 577 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 MAP7D1Q3KQU3 841 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 C1orf146Q5VVC0 180 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 FRG2Q64ET8 278 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 ACSM2BQ68CK6 577 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 USP30Q70CQ3 517 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 YTHDF3Q7Z739 585 aaKnown RBP9.37□□□□□ -0.91
SMPD4-203ENST00000412570 GALNT10Q86SR1 603 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 NLRP8Q86W28 1048 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 PARGQ86W56 976 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 SYT12Q8IV01 421 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 DCUN1D3Q8IWE4 304 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 SPEM1Q8N4L4 309 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 OR4K1Q8NGD4 311 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 OR6Y1Q8NGX8 325 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 WDR48Q8TAF3 677 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 COL26A1Q96A83 441 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 FRG2BQ96QU4 278 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 CCDC106Q9BWC9 280 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 FBXW2Q9UKT8 454 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 ANKDD1BA6NHY2 528 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 STX16O14662 325 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 NPC1O15118 1278 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 RAP1GDS1P52306 607 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 SNRPNP63162 240 aaKnown RBP9.37□□□□□ -0.91
SMPD4-203ENST00000412570 HHEXQ03014 270 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 KCNAB1Q14722 419 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 PCBP2Q15366 365 aaKnown RBP eCLIP9.37□□□□□ -0.913e-6■■■■□ 25.6
SMPD4-203ENST00000412570 RABL3Q5HYI8 236 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 SPANXN4Q5MJ08 99 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 KANK2Q63ZY3 851 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 AMER2Q8N7J2 671 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 OR7G3Q8NG95 312 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 OR7A2PQ8NGA2 310 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 OR5AK3PQ8NH89 298 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 HCAR2Q8TDS4 363 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 ABCG4Q9H172 646 aa9.37□□□□□ -0.91
SMPD4-203ENST00000412570 SNX11Q9Y5W9 270 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms