RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 CBX3Q13185 183 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 MAD2L1Q13257 205 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 DHX34Q14147 1143 aaKnown RBP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 RRS1Q15050 365 aaKnown RBP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 DECR1Q16698 335 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 PARP6Q2NL67 630 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 AMZ1Q400G9 498 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 TNFAIP8L3Q5GJ75 292 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 C9orf152Q5JTZ5 239 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 SPDYCQ5MJ68 293 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 DCST1Q5T197 706 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 RESP18Q5W5W9 173 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 GALNT17Q6IS24 598 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 KLHL10Q6JEL2 608 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 LCN10Q6JVE6 187 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 ARHGAP11AQ6P4F7 1023 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 KCTD18Q6PI47 426 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 BLOC1S2Q6QNY1 142 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 NCCRP1Q6ZVX7 275 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 GTSCR1Q86UQ5 136 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 AACSQ86V21 672 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 FOXRED2Q8IWF2 684 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 IQCF2Q8IXL9 164 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 SYCP3Q8IZU3 236 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 BEST3Q8N1M1 668 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 ARHGAP18Q8N392 663 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 GUF1Q8N442 669 aaKnown RBP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 NKAIN3Q8N8D7 197 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 TRIML1Q8N9V2 468 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC63Q8NA47 563 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 KBTBD3Q8NAB2 608 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 TDRD5Q8NAT2 981 aaKnown RBP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 MAPK1IP1LQ8NDC0 245 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 MCUQ8NE86 351 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 OR1J2Q8NGS2 313 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 HM13Q8TCT9 377 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 RAPGEF5Q92565 580 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 APBB2Q92870 758 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF501Q96CX3 271 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 PGAP3Q96FM1 320 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 FAM81BQ96LP2 452 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZMAT2Q96NC0 199 aaKnown RBP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 DGAT2Q96PD7 388 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 KXD1Q9BQD3 176 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 LRRC1Q9BTT6 524 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 RTN4RQ9BZR6 473 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 MMP27Q9H306 513 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 PIGMQ9H3S5 423 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 ERVMER34-1Q9H9K5 563 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC177Q9NQR7 707 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 INIPQ9NRY2 104 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 MIS18AQ9NYP9 233 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 GDE1Q9NZC3 331 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 TBC1D7Q9P0N9 293 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 STK39Q9UEW8 545 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 BAIAP2L1Q9UHR4 511 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 DBNLQ9UJU6 430 aaKnown RBP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 ANAPC2Q9UJX6 822 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF148Q9UQR1 794 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 WBP11Q9Y2W2 641 aaKnown RBP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCL27Q9Y4X3 112 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 TRPV2Q9Y5S1 764 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 COMMD3-BMI1R4GMX3 469 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 MROH7-TTC4A0A0A0MT08 1334 aa2.35□□□□□ -2.03
HMGB3P2-201ENST00000411913 TET3O43151 1660 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 CLTCQ00610 1675 aaKnown RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 POGZQ7Z3K3 1410 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 ITSN1Q15811 1721 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 MRC1P22897 1456 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 ABCC1P33527 1531 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 ARHGAP5Q13017 1502 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 A0A1W2PRQ8 180 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC162PA2VCL2 907 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 HTR3EA5X5Y0 456 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 TMEM8BA6NDV4 472 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 A8MXE2 369 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 C16orf97H3BN30 126 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 TRAFD1O14545 582 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 KCNN4O15554 427 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SPINT2O43291 252 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 PEX11AO75192 247 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 NDUFS7O75251 213 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF189O75820 626 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 RSL1D1O76021 490 aaKnown RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 GAGE7O76087 117 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 LCA5LO95447 670 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 PMS2P2O95744 297 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 GNA14O95837 355 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 EGFP01133 1207 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 KRT14P02533 472 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 GAGE12FP0CL80 117 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 GAGE12GP0CL81 117 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 GAGE12IP0CL82 117 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 TPBGLP0DKB5 382 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 VDRP11473 427 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 UGT1A1P22309 533 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 TMOD1P28289 359 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 CDC25CP30307 473 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms