RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 HYKKA2RU49 373 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 ZNF839A8K0R7 811 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 EFCAB8A8MWE9 144 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 H0YGG7 62 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 EIF2S1P05198 315 aaKnown RBP16.92■□□□□ 0.3
LSM5-204ENST00000409909 CD63P08962 238 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 IMPA1P29218 277 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 OR1D4P47884 311 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 ARL4CP56559 192 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 ARF3P61204 181 aaPredicted RBP16.92■□□□□ 0.3
LSM5-204ENST00000409909 FASTKD3Q14CZ7 662 aaKnown RBP16.92■□□□□ 0.3
LSM5-204ENST00000409909 FAM214AQ32MH5 1076 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 ZNF425Q6IV72 752 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 UGT3A1Q6NUS8 523 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 MED25Q71SY5 747 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 METTL27Q8N6F8 245 aaPredicted RBP16.92■□□□□ 0.3
LSM5-204ENST00000409909 TMEM102Q8N9M5 508 aaPredicted RBP16.92■□□□□ 0.3
LSM5-204ENST00000409909 TTC29Q8NA56 475 aaPredicted RBP16.92■□□□□ 0.3
LSM5-204ENST00000409909 GABPB2Q8TAK5 448 aaPredicted RBP16.92■□□□□ 0.3
LSM5-204ENST00000409909 PTERQ96BW5 349 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 ABCF3Q9NUQ8 709 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 PDE10AQ9Y233 779 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 SNX24Q9Y343 169 aa16.92■□□□□ 0.3
LSM5-204ENST00000409909 PCDHGA9Q9Y5G4 932 aaKnown RBP16.92■□□□□ 0.3
LSM5-204ENST00000409909 A6NL46 340 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 TSPAN12O95859 305 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 CSRP3P50461 194 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 PGDP52209 483 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 KCNC4Q03721 635 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 FRG1Q14331 258 aaKnown RBP16.91■□□□□ 0.3
LSM5-204ENST00000409909 NAA25Q14CX7 972 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 PRTGQ2VWP7 1150 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 MBOAT1Q6ZNC8 495 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 PPP1R32Q7Z5V6 425 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 TEX19Q8NA77 164 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 FDCSPQ8NFU4 85 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 FKBP10Q96AY3 582 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 C10orf90Q96M02 699 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 OR2A5Q96R48 311 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 SLC26A1Q9H2B4 701 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 ANKMY1Q9P2S6 941 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 MAU2Q9Y6X3 613 aa16.91■□□□□ 0.3
LSM5-204ENST00000409909 E7ESA3 106 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 MASP2O00187 686 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 ALBP02768 609 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 RGS4P49798 205 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 PDIA2Q13087 525 aaKnown RBP16.9■□□□□ 0.3
LSM5-204ENST00000409909 CBLBQ13191 982 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 NKG7Q16617 165 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 HECTD2Q5U5R9 776 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 LRRC8EQ6NSJ5 796 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 FBXO36Q8NEA4 188 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 SPATA4Q8NEY3 305 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 MCOLN3Q8TDD5 553 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 LINGO1Q96FE5 620 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 IP6K3Q96PC2 410 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 SPSB2Q99619 263 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 OLFM1Q99784 485 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 NUDT9Q9BW91 350 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 WDR54Q9H977 334 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 PARVBQ9HBI1 364 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 CUEDC1Q9NWM3 386 aaPredicted RBP16.9■□□□□ 0.3
LSM5-204ENST00000409909 P4HTMQ9NXG6 502 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 CTSFQ9UBX1 484 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 VWA7Q9Y334 891 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 PSAT1Q9Y617 370 aa16.9■□□□□ 0.3
LSM5-204ENST00000409909 HAT1O14929 419 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 CCNDBP1O95273 360 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 C8GP07360 202 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 PIM1P11309 404 aaPredicted RBP16.89■□□□□ 0.29
LSM5-204ENST00000409909 FDXRP22570 491 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 RRADP55042 308 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 ABATP80404 500 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 RELAQ04206 551 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 IGFBP7Q16270 282 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 PHKG1Q16816 387 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 HKDC1Q2TB90 917 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 DCAF10Q5QP82 559 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 THEMIS2Q5TEJ8 643 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 SHISA6Q6ZSJ9 500 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 PLD3Q8IV08 490 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 GPATCH11Q8N954 259 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 CCDC138Q96M89 665 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 CLMPQ9H6B4 373 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 MOCS1Q9NZB8 636 aa16.89■□□□□ 0.29
LSM5-204ENST00000409909 VSTM2BA6NLU5 285 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 H7BY64 318 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 SLC16A5O15375 505 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 RAD51CO43502 376 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 EZRP15311 586 aaKnown RBP16.88■□□□□ 0.29
LSM5-204ENST00000409909 EMP3P54852 163 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 IL2P60568 153 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 TBPL1P62380 186 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 ETF1P62495 437 aaKnown RBP16.88■□□□□ 0.29
LSM5-204ENST00000409909 MGAT5Q09328 741 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 SP140Q13342 867 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 RAPSNQ13702 412 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 ZXDCQ2QGD7 858 aaPredicted RBP16.88■□□□□ 0.29
LSM5-204ENST00000409909 MYO1HQ8N1T3 1032 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 ARHGEF39Q8N4T4 335 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms