RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 SLC39A3Q9BRY0 314 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 WRAP53Q9BUR4 548 aaKnown RBP7.27□□□□□ -1.25
CXCR4-202ENST00000409817 ACPTQ9BZG2 426 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 CLMPQ9H6B4 373 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 NANOGQ9H9S0 305 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 SLC28A3Q9HAS3 691 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 BRF2Q9HAW0 419 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 PRSS16Q9NQE7 514 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 ITM2CQ9NQX7 267 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 CCM2LQ9NUG4 571 aaPredicted RBP7.27□□□□□ -1.25
CXCR4-202ENST00000409817 SCOCQ9UIL1 159 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 CNOT6Q9ULM6 557 aaKnown RBP7.27□□□□□ -1.25
CXCR4-202ENST00000409817 RAB26Q9ULW5 256 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 SLC22A14Q9Y267 594 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 FAM221AA4D161 298 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 CLGNO14967 610 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 DENRO43583 198 aaKnown RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 RNASEH1O60930 286 aaKnown RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 LILRB5O75023 590 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 ERN1O75460 977 aaKnown RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 PDYNP01213 254 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 EPHX1P07099 455 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 ADH6P28332 368 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 IL12RB1P42701 662 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 MAGEA10P43363 369 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 GSK3BP49841 420 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 CLDN8P56748 225 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 RPS14P62263 151 aaKnown RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 IRF8Q02556 426 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 LIPEQ05469 1076 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 CHIT1Q13231 466 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 CAPRIN1Q14444 709 aaKnown RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 MAPKAPK3Q16644 382 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 ZXDCQ2QGD7 858 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 ITPRIPL2Q3MIP1 535 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 POM121L1PQ3SYA9 428 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 USP39Q53GS9 565 aaKnown RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 SNAP47Q5SQN1 464 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 FAM219BQ5XKK7 198 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 LPCAT4Q643R3 524 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 GRHL2Q6ISB3 625 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 CES5AQ6NT32 575 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 AGTRAPQ6RW13 159 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 UNC5DQ6UXZ4 953 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 DLEU7Q6UYE1 221 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 THOC6Q86W42 341 aaKnown RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 KIAA2013Q8IYS2 634 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 LIX1Q8N485 282 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 BEND7Q8N7W2 519 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 GATA6Q92908 595 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 TESCQ96BS2 214 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 REPS1Q96D71 796 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 FCRL1Q96LA6 429 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 HBEGFQ99075 208 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 CGREF1Q99674 301 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 KCTD14Q9BQ13 255 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 NKX2-4Q9H2Z4 354 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 RMND5AQ9H871 391 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 COPS7BQ9H9Q2 264 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 FBRSQ9HAH7 460 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 IL1RL2Q9HB29 575 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 STOX2Q9P2F5 926 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 MAGEL2Q9UJ55 1249 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 ITM2BQ9Y287 266 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 FADS3Q9Y5Q0 445 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 KCNE2Q9Y6J6 123 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 TCF20Q9UGU0 1960 aaKnown RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 DHRS12A0PJE2 317 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 MGAT4DA6NG13 374 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 ARPC2O15144 300 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 INPP4BO15327 924 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 GMNNO75496 209 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 RNASEH2AO75792 299 aaKnown RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 C1orf105O95561 183 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 PGRP06401 933 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 PIM1P11309 404 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 BCKDHAP12694 445 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 EPHA1P21709 976 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 C5AR1P21730 350 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 P2RY2P41231 377 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 GRIA3P42263 894 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 HALP42357 657 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 TNFRSF4P43489 277 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 AQP4P55087 323 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 C21orf58P58505 322 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 HMGCS1Q01581 520 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 MESP2Q0VG99 397 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 ABRQ12979 859 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 SFT2D3Q587I9 215 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 SGO1Q5FBB7 561 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 CAPN13Q6MZZ7 669 aaPredicted RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 SYCE2Q6PIF2 218 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 TRAPPC5Q8IUR0 188 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 MMAAQ8IVH4 418 aaKnown RBP7.26□□□□□ -1.25
CXCR4-202ENST00000409817 SLITRK4Q8IW52 837 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 LILRA2Q8N149 483 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 PACRGLQ8N7B6 248 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 OR2L2Q8NH16 312 aa7.26□□□□□ -1.25
CXCR4-202ENST00000409817 DNAJB14Q8TBM8 379 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms