RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 CALHM3Q86XJ0 350 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 SYT12Q8IV01 421 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 SYTL1Q8IYJ3 562 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 TMEM132CQ8N3T6 1108 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 OR52E4Q8NGH9 312 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 OR9A1PQ8NGU1 263 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 HM13Q8TCT9 377 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 FIG4Q92562 907 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 AURKBQ96GD4 344 aaPredicted RBP19.46■□□□□ 0.71
USP39-204ENST00000409766 COX14Q96I36 57 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 YIPF3Q9GZM5 350 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 PCYT1BQ9Y5K3 369 aaPredicted RBP19.46■□□□□ 0.71
USP39-204ENST00000409766 RNF103-CHMP3A0A140T963 221 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 MGAT4DA6NG13 374 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 GSTA4O15217 222 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 ETHE1O95571 254 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 RAP2AP10114 183 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 DRD3P35462 400 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 EIF2DP41214 584 aaKnown RBP19.46■□□□□ 0.71
USP39-204ENST00000409766 KIR3DL1P43629 444 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 GZMMP51124 257 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 NFE2L1Q14494 772 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 UGT8Q16880 541 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 DPY19L1Q2PZI1 675 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 FAM46CQ5VWP2 391 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 OR4F3Q6IEY1 312 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 IYDQ6PHW0 289 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 SYCE2Q6PIF2 218 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 GCNT7Q6ZNI0 430 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 TBCDQ9BTW9 1192 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 SGPP1Q9BX95 441 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 ZNF639Q9UID6 485 aa19.46■□□□□ 0.71
USP39-204ENST00000409766 GSNP06396 782 aa19.45■□□□□ 0.7
USP39-204ENST00000409766 C7P10643 843 aa19.45■□□□□ 0.7
USP39-204ENST00000409766 C21orf58P58505 322 aa19.45■□□□□ 0.7
USP39-204ENST00000409766 ACSM2AQ08AH3 577 aa19.45■□□□□ 0.7
USP39-204ENST00000409766 FAM98BQ52LJ0 330 aaKnown RBP19.45■□□□□ 0.7
USP39-204ENST00000409766 ACSM2BQ68CK6 577 aa19.45■□□□□ 0.7
USP39-204ENST00000409766 ADAMTSL4Q6UY14 1074 aa19.45■□□□□ 0.7
USP39-204ENST00000409766 YAF2Q8IY57 180 aa19.45■□□□□ 0.7
USP39-204ENST00000409766 LRRC56Q8IYG6 542 aaPredicted RBP19.45■□□□□ 0.7
USP39-204ENST00000409766 MICU2Q8IYU8 434 aa19.45■□□□□ 0.7
USP39-204ENST00000409766 C10orf111Q8N326 155 aa19.45■□□□□ 0.7
USP39-204ENST00000409766 OR7A2PQ8NGA2 310 aa19.45■□□□□ 0.7
USP39-204ENST00000409766 HUS1BQ8NHY5 278 aa19.45■□□□□ 0.7
USP39-204ENST00000409766 WDR34Q96EX3 536 aa19.45■□□□□ 0.7
USP39-204ENST00000409766 ADGRE2Q9UHX3 823 aa19.45■□□□□ 0.7
USP39-204ENST00000409766 TMEM98Q9Y2Y6 226 aa19.45■□□□□ 0.7
USP39-204ENST00000409766 FAM220BPB1ANY3 271 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 RFXANKO14593 260 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 SCELO95171 688 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 MAGEA10P43363 369 aaPredicted RBP19.44■□□□□ 0.7
USP39-204ENST00000409766 SRSF11Q05519 484 aaKnown RBP19.44■□□□□ 0.7
USP39-204ENST00000409766 FAM83HQ6ZRV2 1179 aaPredicted RBP19.44■□□□□ 0.7
USP39-204ENST00000409766 TMPRSS11BQ86T26 416 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 BDH2Q9BUT1 245 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 ZDHHC5Q9C0B5 715 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 REXO4Q9GZR2 422 aaKnown RBP19.44■□□□□ 0.7
USP39-204ENST00000409766 NKX2-4Q9H2Z4 354 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 CARS2Q9HA77 564 aaKnown RBP19.44■□□□□ 0.7
USP39-204ENST00000409766 SH2B3Q9UQQ2 575 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 STON1Q9Y6Q2 735 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 XIRP2A4UGR9 3374 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 TRPM6Q9BX84 2022 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 CXCR6O00574 342 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 CLOCKO15516 846 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 LINC01565O15544 149 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 SCN2BO60939 215 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 PRSS23O95084 383 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 PGM3O95394 542 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 WNT3P56703 355 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 TAS2R38P59533 333 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 RAE1P78406 368 aaKnown RBP19.44■□□□□ 0.7
USP39-204ENST00000409766 TAP2Q03519 686 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 MAP7Q14244 749 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 SF1Q15637 639 aaKnown RBP19.44■□□□□ 0.7
USP39-204ENST00000409766 CATSPEREQ5SY80 951 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 MED27Q6P2C8 311 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 PNCKQ6P2M8 343 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 TMEM184AQ6ZMB5 413 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 FAM86B1Q8N7N1 296 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 OR8J2Q8NGG1 315 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 PRPF18Q99633 342 aaKnown RBP19.44■□□□□ 0.7
USP39-204ENST00000409766 KXD1Q9BQD3 176 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 OR52A5Q9H2C5 316 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 NTN4Q9HB63 628 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 ITM2CQ9NQX7 267 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 UNC80Q8N2C7 3258 aa19.44■□□□□ 0.7
USP39-204ENST00000409766 EME2A4GXA9 379 aaPredicted RBP19.43■□□□□ 0.7
USP39-204ENST00000409766 IGLON5A6NGN9 336 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 PLOD2O00469 737 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 EI24O14681 340 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 PABPC4LP0CB38 370 aaKnown RBP19.43■□□□□ 0.7
USP39-204ENST00000409766 PCNAP12004 261 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 TRPC1P48995 793 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 PNLIPRP1P54315 467 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 CHRNB3Q05901 458 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 ENPP2Q13822 863 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 STARD3Q14849 445 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 PPP2R2DQ66LE6 453 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms